RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 ZNF143P52747 638 aaPredicted RBP9.22□□□□□ -0.93
CBX3-206ENST00000481057 ZNF445P59923 1031 aa9.22□□□□□ -0.93
CBX3-206ENST00000481057 SERINC3Q13530 473 aa9.22□□□□□ -0.93
CBX3-206ENST00000481057 ZNF655Q8N720 491 aaPredicted RBP9.22□□□□□ -0.93
CBX3-206ENST00000481057 GBP3Q9H0R5 595 aa9.22□□□□□ -0.93
CBX3-206ENST00000481057 WHRNQ9P202 907 aa9.22□□□□□ -0.93
CBX3-206ENST00000481057 CCNL1Q9UK58 526 aaPredicted RBP9.22□□□□□ -0.93
CBX3-206ENST00000481057 QRICH2Q9H0J4 1663 aa9.21□□□□□ -0.93
CBX3-206ENST00000481057 ECE1P42892 770 aa9.21□□□□□ -0.94
CBX3-206ENST00000481057 CREG2Q8IUH2 290 aa9.21□□□□□ -0.94
CBX3-206ENST00000481057 NGDNQ8NEJ9 315 aaKnown RBP9.21□□□□□ -0.94
CBX3-206ENST00000481057 TCTN2Q96GX1 697 aa9.21□□□□□ -0.94
CBX3-206ENST00000481057 FGD4Q96M96 766 aa9.21□□□□□ -0.94
CBX3-206ENST00000481057 LMCD1Q9NZU5 365 aa9.21□□□□□ -0.94
CBX3-206ENST00000481057 RAPGEFL1Q9UHV5 662 aa9.21□□□□□ -0.94
CBX3-206ENST00000481057 ARFGEF1Q9Y6D6 1849 aa9.21□□□□□ -0.94
CBX3-206ENST00000481057 MKI67P46013 3256 aaKnown RBP9.21□□□□□ -0.94
CBX3-206ENST00000481057 ANKARQ7Z5J8 1434 aa9.21□□□□□ -0.94
CBX3-206ENST00000481057 U2SURPO15042 1029 aaKnown RBP9.2□□□□□ -0.94
CBX3-206ENST00000481057 SUSD5O60279 629 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 NAT2P11245 290 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 FUT4P22083 530 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 CTSKP43235 329 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 NOL9Q5SY16 702 aaKnown RBP9.2□□□□□ -0.94
CBX3-206ENST00000481057 SOGA3Q5TF21 947 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 CYP4F22Q6NT55 531 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 ZNF513Q8N8E2 541 aaPredicted RBP9.2□□□□□ -0.94
CBX3-206ENST00000481057 AGBL5Q8NDL9 886 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 BRF1Q92994 677 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 DSCC1Q9BVC3 393 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 CARS2Q9HA77 564 aaKnown RBP9.2□□□□□ -0.94
CBX3-206ENST00000481057 SIRPGQ9P1W8 387 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 MSRB2Q9Y3D2 182 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 PCDHA11Q9Y5I1 949 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 VCANP13611 3396 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 ABCC11Q96J66 1382 aa9.2□□□□□ -0.94
CBX3-206ENST00000481057 A0A087WZG4 1122 aa9.19□□□□□ -0.94
CBX3-206ENST00000481057 MEIS1O00470 390 aa9.19□□□□□ -0.94
CBX3-206ENST00000481057 ZP2Q05996 745 aa9.19□□□□□ -0.94
CBX3-206ENST00000481057 TP53INP2Q8IXH6 220 aa9.19□□□□□ -0.94
CBX3-206ENST00000481057 Q8N3U1 123 aa9.19□□□□□ -0.94
CBX3-206ENST00000481057 FIBCD1Q8N539 461 aa9.19□□□□□ -0.94
CBX3-206ENST00000481057 APEX2Q9UBZ4 518 aa9.19□□□□□ -0.94
CBX3-206ENST00000481057 KIF13BQ9NQT8 1826 aa9.19□□□□□ -0.94
CBX3-206ENST00000481057 KDM6AO15550 1401 aaPredicted RBP9.18□□□□□ -0.94
CBX3-206ENST00000481057 PPM1BO75688 479 aa9.18□□□□□ -0.94
CBX3-206ENST00000481057 KCNA3P22001 575 aa9.18□□□□□ -0.94
CBX3-206ENST00000481057 MAP2K2P36507 400 aa9.18□□□□□ -0.94
CBX3-206ENST00000481057 BRCA1P38398 1863 aaKnown RBP9.18□□□□□ -0.94
CBX3-206ENST00000481057 EGR3Q06889 387 aa9.18□□□□□ -0.94
CBX3-206ENST00000481057 DALRD3Q5D0E6 543 aaKnown RBP9.18□□□□□ -0.94
CBX3-206ENST00000481057 CRTC3Q6UUV7 619 aa9.18□□□□□ -0.94
CBX3-206ENST00000481057 ADAT2Q7Z6V5 191 aaKnown RBP9.18□□□□□ -0.94
CBX3-206ENST00000481057 LDHDQ86WU2 507 aa9.18□□□□□ -0.94
CBX3-206ENST00000481057 WDR17Q8IZU2 1322 aa9.18□□□□□ -0.94
CBX3-206ENST00000481057 USHBP1Q8N6Y0 703 aa9.18□□□□□ -0.94
CBX3-206ENST00000481057 ADCY4Q8NFM4 1077 aa9.18□□□□□ -0.94
CBX3-206ENST00000481057 NOL6Q9H6R4 1146 aaKnown RBP9.18□□□□□ -0.94
CBX3-206ENST00000481057 USP54Q70EL1 1684 aa9.17□□□□□ -0.94
CBX3-206ENST00000481057 H0Y8X5 98 aa9.17□□□□□ -0.94
CBX3-206ENST00000481057 GCP02774 474 aa9.17□□□□□ -0.94
CBX3-206ENST00000481057 GSNP06396 782 aa9.17□□□□□ -0.94
CBX3-206ENST00000481057 GP2P55259 537 aaKnown RBP9.17□□□□□ -0.94
CBX3-206ENST00000481057 TEKQ02763 1124 aa9.17□□□□□ -0.94
CBX3-206ENST00000481057 PLCL1Q15111 1095 aa9.17□□□□□ -0.94
CBX3-206ENST00000481057 RNF111Q6ZNA4 994 aa9.17□□□□□ -0.94
CBX3-206ENST00000481057 EEPD1Q7L9B9 569 aa9.17□□□□□ -0.94
CBX3-206ENST00000481057 LINC00116Q8NCU8 138 aa9.17□□□□□ -0.94
CBX3-206ENST00000481057 APBA2Q99767 749 aa9.17□□□□□ -0.94
CBX3-206ENST00000481057 SPTBN5Q9NRC6 3674 aaKnown RBP9.16□□□□□ -0.94
CBX3-206ENST00000481057 DAPK1P53355 1430 aa9.16□□□□□ -0.94
CBX3-206ENST00000481057 BMP8BP34820 402 aa9.16□□□□□ -0.94
CBX3-206ENST00000481057 PCBP3P57721 371 aaKnown RBP9.16□□□□□ -0.94
CBX3-206ENST00000481057 TMEM132EQ6IEE7 984 aa9.16□□□□□ -0.94
CBX3-206ENST00000481057 RCC1LQ96I51 464 aaKnown RBP9.16□□□□□ -0.94
CBX3-206ENST00000481057 FOXP3Q9BZS1 431 aa9.16□□□□□ -0.94
CBX3-206ENST00000481057 EPN3Q9H201 632 aa9.16□□□□□ -0.94
CBX3-206ENST00000481057 PRDM7Q9NQW5 492 aa9.16□□□□□ -0.94
CBX3-206ENST00000481057 CGGBP1Q9UFW8 167 aaPredicted RBP9.16□□□□□ -0.94
CBX3-206ENST00000481057 TCFL5Q9UL49 500 aa9.16□□□□□ -0.94
CBX3-206ENST00000481057 DIS3Q9Y2L1 958 aaKnown RBP9.16□□□□□ -0.94
CBX3-206ENST00000481057 SUGT1Q9Y2Z0 365 aa9.16□□□□□ -0.94
CBX3-206ENST00000481057 SF3B6Q9Y3B4 125 aaKnown RBP9.16□□□□□ -0.94
CBX3-206ENST00000481057 LY75O60449 1722 aa9.16□□□□□ -0.94
CBX3-206ENST00000481057 ANKRD50Q9ULJ7 1429 aa9.15□□□□□ -0.94
CBX3-206ENST00000481057 SYPP08247 313 aa9.15□□□□□ -0.94
CBX3-206ENST00000481057 MMP10P09238 476 aa9.15□□□□□ -0.94
CBX3-206ENST00000481057 SLC10A6Q3KNW5 377 aa9.15□□□□□ -0.94
CBX3-206ENST00000481057 SLC23A3Q6PIS1 610 aa9.15□□□□□ -0.94
CBX3-206ENST00000481057 ABI1Q8IZP0 508 aa9.15□□□□□ -0.94
CBX3-206ENST00000481057 ARHGEF39Q8N4T4 335 aa9.15□□□□□ -0.94
CBX3-206ENST00000481057 SYTL4Q96C24 671 aaPredicted RBP9.15□□□□□ -0.94
CBX3-206ENST00000481057 ZDHHC15Q96MV8 337 aa9.15□□□□□ -0.94
CBX3-206ENST00000481057 OSBPL2Q9H1P3 480 aa9.15□□□□□ -0.94
CBX3-206ENST00000481057 ADAMTS6Q9UKP5 1117 aa9.15□□□□□ -0.94
CBX3-206ENST00000481057 ITSN1Q15811 1721 aa9.14□□□□□ -0.95
CBX3-206ENST00000481057 ZNF205O95201 554 aa9.14□□□□□ -0.95
CBX3-206ENST00000481057 SAFB2Q14151 953 aaKnown RBP eCLIP9.14□□□□□ -0.95
CBX3-206ENST00000481057 RASA3Q14644 834 aa9.14□□□□□ -0.95
CBX3-206ENST00000481057 PPP2R5DQ14738 602 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms