RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 CERS5Q8N5B7 392 aa9.4□□□□□ -0.9
USP30-206ENST00000479219 CCDC42Q96M95 316 aa9.4□□□□□ -0.9
USP30-206ENST00000479219 CEP63Q96MT8 703 aa9.4□□□□□ -0.9
USP30-206ENST00000479219 SEMA6BQ9H3T3 888 aa9.4□□□□□ -0.9
USP30-206ENST00000479219 SLC39A2Q9NP94 309 aa9.4□□□□□ -0.9
USP30-206ENST00000479219 GUCA1BQ9UMX6 200 aa9.4□□□□□ -0.9
USP30-206ENST00000479219 REXO2Q9Y3B8 237 aaKnown RBP9.4□□□□□ -0.9
USP30-206ENST00000479219 RRP15Q9Y3B9 282 aaKnown RBP9.4□□□□□ -0.9
USP30-206ENST00000479219 SAR1BQ9Y6B6 198 aa9.4□□□□□ -0.9
USP30-206ENST00000479219 COL2A1P02458 1487 aaPredicted RBP9.4□□□□□ -0.91
USP30-206ENST00000479219 ADAMTSL1Q8N6G6 1762 aa9.4□□□□□ -0.91
USP30-206ENST00000479219 SIPA1L1O43166 1804 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 CYP3A7-CYP3A51PA0A087WV96 503 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 MPHOSPH10O00566 681 aaKnown RBP9.39□□□□□ -0.91
USP30-206ENST00000479219 TBX3O15119 743 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 CYP3A7P24462 503 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 VAV2P52735 878 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 LONRF2Q1L5Z9 754 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 PPP4R3CPQ6ZMV5 832 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 KRT27Q7Z3Y8 459 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 DDX12PQ92771 950 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 IDI2Q9BXS1 227 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 LUC7LQ9NQ29 371 aaKnown RBP9.39□□□□□ -0.91
USP30-206ENST00000479219 PI4KBQ9UBF8 816 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 PUF60Q9UHX1 559 aaKnown RBP9.39□□□□□ -0.91
USP30-206ENST00000479219 ATF5Q9Y2D1 282 aaPredicted RBP9.39□□□□□ -0.91
USP30-206ENST00000479219 KIF13BQ9NQT8 1826 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 FOSP01100 380 aaPredicted RBP9.39□□□□□ -0.91
USP30-206ENST00000479219 CRKP46108 304 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 HERVK_113P62684 666 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 FKBP3Q00688 224 aaKnown RBP9.39□□□□□ -0.91
USP30-206ENST00000479219 MAP9Q49MG5 647 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 APOBEC3HQ6NTF7 200 aaKnown RBP9.39□□□□□ -0.91
USP30-206ENST00000479219 WDR93Q6P2C0 686 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 TRIM58Q8NG06 486 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 ERMNQ8TAM6 284 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 RUBCNQ92622 972 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 ANKZF1Q9H8Y5 726 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 KCNG1Q9UIX4 513 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 PITPNM2Q9BZ72 1349 aa9.39□□□□□ -0.91
USP30-206ENST00000479219 TARSL2A2RTX5 802 aaKnown RBP9.38□□□□□ -0.91
USP30-206ENST00000479219 POTEMA6NI47 508 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 F8W031 263 aaPredicted RBP9.38□□□□□ -0.91
USP30-206ENST00000479219 MAP2K7O14733 419 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 LCA5LO95447 670 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 IDEP14735 1019 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 NOP2P46087 812 aaKnown RBP9.38□□□□□ -0.91
USP30-206ENST00000479219 STRIP1Q5VSL9 837 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 CCDC70Q6NSX1 233 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 SYN2Q92777 582 aaPredicted RBP9.38□□□□□ -0.91
USP30-206ENST00000479219 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
USP30-206ENST00000479219 EPC1Q9H2F5 836 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 YY1AP1Q9H869 796 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 AGPAT5Q9NUQ2 364 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 ZNF646O15015 1829 aaPredicted RBP9.38□□□□□ -0.91
USP30-206ENST00000479219 H3BQF6 201 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 TRIM66O15016 1216 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 SLC1A4P43007 532 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 EIF6P56537 245 aaKnown RBP9.38□□□□□ -0.91
USP30-206ENST00000479219 FAM26FQ5R3K3 315 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 TMEM179Q6ZVK1 233 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 GMCL1P1Q8NEA9 526 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 HAS1Q92839 578 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 MBOAT7Q96N66 472 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 ALS2CR12Q96Q35 445 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 LCMT1Q9UIC8 334 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 FAM184BQ9ULE4 1060 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 SIK3Q9Y2K2 1263 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 USP17L10C9JJH3 530 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 PPP1R11O60927 126 aaPredicted RBP9.38□□□□□ -0.91
USP30-206ENST00000479219 TACC1O75410 805 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 RPS6KA5O75582 802 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 PRLRP16471 622 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 MARSP56192 900 aaKnown RBP9.38□□□□□ -0.91
USP30-206ENST00000479219 COASYQ13057 564 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 CERKLQ49MI3 558 aaPredicted RBP9.38□□□□□ -0.91
USP30-206ENST00000479219 LRRC55Q6ZSA7 311 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 DYMQ7RTS9 669 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 CCDC155Q8N6L0 562 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 GMCL1Q96IK5 515 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 PANK4Q9NVE7 773 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 SERPINA10Q9UK55 444 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 JRKLQ9Y4A0 524 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 PCDHA1Q9Y5I3 950 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 COL4A3BPQ9Y5P4 624 aa9.38□□□□□ -0.91
USP30-206ENST00000479219 A0A0U1RQJ8 604 aa9.37□□□□□ -0.91
USP30-206ENST00000479219 SSU72P8A0A1W2PR75 194 aa9.37□□□□□ -0.91
USP30-206ENST00000479219 ITIH3Q06033 890 aa9.37□□□□□ -0.91
USP30-206ENST00000479219 UBE2SQ16763 222 aa9.37□□□□□ -0.91
USP30-206ENST00000479219 ATRIPQ8WXE1 791 aa9.37□□□□□ -0.91
USP30-206ENST00000479219 AMNQ9BXJ7 453 aa9.37□□□□□ -0.91
USP30-206ENST00000479219 IFIH1Q9BYX4 1025 aaKnown RBP9.37□□□□□ -0.91
USP30-206ENST00000479219 DEF6Q9H4E7 631 aa9.37□□□□□ -0.91
USP30-206ENST00000479219 KCNMB3Q9NPA1 279 aa9.37□□□□□ -0.91
USP30-206ENST00000479219 RGPD3A6NKT7 1758 aaPredicted RBP9.37□□□□□ -0.91
USP30-206ENST00000479219 RGPD4Q7Z3J3 1758 aa9.37□□□□□ -0.91
USP30-206ENST00000479219 RASSF10A6NK89 507 aa9.37□□□□□ -0.91
USP30-206ENST00000479219 EDIL3O43854 480 aa9.37□□□□□ -0.91
USP30-206ENST00000479219 SCNN1DP51172 638 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms