RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 RGL3Q3MIN7 710 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 FAM26FQ5R3K3 315 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 STEAP3Q658P3 488 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 DENND5AQ6IQ26 1287 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 STK32CQ86UX6 486 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 FAM124AQ86V42 546 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 SLC43A3Q8NBI5 491 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 TOE1Q96GM8 510 aaKnown RBP6.71□□□□□ -1.34
ITGB1-208ENST00000464001 C1orf159Q96HA4 380 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 EPB41L1Q9H4G0 881 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 ST7Q9NRC1 585 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 FBXL7Q9UJT9 491 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 PCDHB4Q9Y5E5 795 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 NPFFR2Q9Y5X5 522 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 MAFKO60675 156 aa6.7□□□□□ -1.34
ITGB1-208ENST00000464001 TADA3O75528 432 aa6.7□□□□□ -1.34
ITGB1-208ENST00000464001 CAPNS1P04632 268 aa6.7□□□□□ -1.34
ITGB1-208ENST00000464001 PPP2R2AP63151 447 aa6.7□□□□□ -1.34
ITGB1-208ENST00000464001 CR1LQ2VPA4 569 aa6.7□□□□□ -1.34
ITGB1-208ENST00000464001 EMC4Q5J8M3 183 aa6.7□□□□□ -1.34
ITGB1-208ENST00000464001 ANKS3Q6ZW76 656 aa6.7□□□□□ -1.34
ITGB1-208ENST00000464001 HNRNPLLQ8WVV9 542 aaKnown RBP6.7□□□□□ -1.34
ITGB1-208ENST00000464001 A0A1W2PQU0 124 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 MROH6A6NGR9 719 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 GRIA2P42262 883 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 NFKB2Q00653 900 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 HSP90AA2PQ14568 343 aaPredicted RBP6.69□□□□□ -1.34
ITGB1-208ENST00000464001 DDR2Q16832 855 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 MCTP2Q6DN12 878 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 BORAQ6PGQ7 559 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 LGI4Q8N135 537 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.69□□□□□ -1.34
ITGB1-208ENST00000464001 SGSM3Q96HU1 749 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 GMLQ99445 158 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 IER2Q9BTL4 223 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 GPR27Q9NS67 375 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 DTLQ9NZJ0 730 aa6.69□□□□□ -1.34
ITGB1-208ENST00000464001 TCRBV5S2A0A599 114 aa6.68□□□□□ -1.34
ITGB1-208ENST00000464001 IQCA1LA6NCM1 817 aa6.68□□□□□ -1.34
ITGB1-208ENST00000464001 DDX3XO00571 662 aaKnown RBP eCLIP6.68□□□□□ -1.348e-20■■■■□ 24.4
ITGB1-208ENST00000464001 CYP7B1O75881 506 aa6.68□□□□□ -1.34
ITGB1-208ENST00000464001 ITGB3P05106 788 aa6.68□□□□□ -1.34
ITGB1-208ENST00000464001 ZNF827Q17R98 1081 aa6.68□□□□□ -1.34
ITGB1-208ENST00000464001 PRR31Q5SQ13 230 aa6.68□□□□□ -1.34
ITGB1-208ENST00000464001 CELF2-AS1Q8N7Q2 184 aa6.68□□□□□ -1.34
ITGB1-208ENST00000464001 ARRDC4Q8NCT1 418 aa6.68□□□□□ -1.34
ITGB1-208ENST00000464001 PHOSPHO1Q8TCT1 267 aa6.68□□□□□ -1.34
ITGB1-208ENST00000464001 SMOC1Q9H4F8 434 aa6.68□□□□□ -1.34
ITGB1-208ENST00000464001 KRIT1O00522 736 aa6.67□□□□□ -1.34
ITGB1-208ENST00000464001 ADAM9Q13443 819 aa6.67□□□□□ -1.34
ITGB1-208ENST00000464001 PRAMEF18Q5VWM3 479 aa6.67□□□□□ -1.34
ITGB1-208ENST00000464001 HHIPL2Q6UWX4 724 aa6.67□□□□□ -1.34
ITGB1-208ENST00000464001 RSPO2Q6UXX9 243 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-208ENST00000464001 USP53Q70EK8 1073 aa6.67□□□□□ -1.34
ITGB1-208ENST00000464001 TRIM48Q8IWZ4 208 aa6.67□□□□□ -1.34
ITGB1-208ENST00000464001 TXNDC5Q8NBS9 432 aaKnown RBP6.67□□□□□ -1.34
ITGB1-208ENST00000464001 LCORQ96JN0 433 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-208ENST00000464001 CLIC6Q96NY7 704 aa6.67□□□□□ -1.34
ITGB1-208ENST00000464001 MYOTQ9UBF9 498 aa6.67□□□□□ -1.34
ITGB1-208ENST00000464001 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
ITGB1-208ENST00000464001 KLF4O43474 513 aa6.66□□□□□ -1.34
ITGB1-208ENST00000464001 DLX3O60479 287 aa6.66□□□□□ -1.34
ITGB1-208ENST00000464001 KRTAP10-2P60368 255 aa6.66□□□□□ -1.34
ITGB1-208ENST00000464001 CYP4F22Q6NT55 531 aa6.66□□□□□ -1.34
ITGB1-208ENST00000464001 TEPPQ6URK8 271 aa6.66□□□□□ -1.34
ITGB1-208ENST00000464001 ZNF428Q96B54 188 aa6.66□□□□□ -1.34
ITGB1-208ENST00000464001 WRNIP1Q96S55 665 aa6.66□□□□□ -1.34
ITGB1-208ENST00000464001 AARSD1Q9BTE6 412 aaKnown RBP6.66□□□□□ -1.34
ITGB1-208ENST00000464001 SLC6A20Q9NP91 592 aa6.66□□□□□ -1.34
ITGB1-208ENST00000464001 JAG2Q9Y219 1238 aa6.66□□□□□ -1.34
ITGB1-208ENST00000464001 PLATP00750 562 aa6.65□□□□□ -1.34
ITGB1-208ENST00000464001 LRG1P02750 347 aa6.65□□□□□ -1.34
ITGB1-208ENST00000464001 CYP1A1P04798 512 aaPredicted RBP6.65□□□□□ -1.34
ITGB1-208ENST00000464001 ZXDCQ2QGD7 858 aaPredicted RBP6.65□□□□□ -1.34
ITGB1-208ENST00000464001 DCAF4Q8WV16 495 aa6.65□□□□□ -1.34
ITGB1-208ENST00000464001 TMEM209Q96SK2 561 aa6.65□□□□□ -1.34
ITGB1-208ENST00000464001 RBM15Q96T37 977 aaKnown RBP eCLIP6.65□□□□□ -1.34
ITGB1-208ENST00000464001 GPR20Q99678 358 aa6.65□□□□□ -1.34
ITGB1-208ENST00000464001 PHF20Q9BVI0 1012 aa6.65□□□□□ -1.34
ITGB1-208ENST00000464001 L2HGDHQ9H9P8 463 aa6.65□□□□□ -1.34
ITGB1-208ENST00000464001 ASH2LQ9UBL3 628 aa6.65□□□□□ -1.34
ITGB1-208ENST00000464001 INVSQ9Y283 1065 aa6.65□□□□□ -1.34
ITGB1-208ENST00000464001 FGFR1P11362 822 aa6.64□□□□□ -1.35
ITGB1-208ENST00000464001 ZNF28P17035 718 aa6.64□□□□□ -1.35
ITGB1-208ENST00000464001 IL13P35225 146 aa6.64□□□□□ -1.35
ITGB1-208ENST00000464001 MAGEA10P43363 369 aaPredicted RBP6.64□□□□□ -1.35
ITGB1-208ENST00000464001 RBM25P49756 843 aaKnown RBP6.64□□□□□ -1.35
ITGB1-208ENST00000464001 TBC1D10BQ4KMP7 808 aaPredicted RBP6.64□□□□□ -1.35
ITGB1-208ENST00000464001 GGNQ86UU5 652 aa6.64□□□□□ -1.35
ITGB1-208ENST00000464001 ST13P5Q8NFI4 369 aaPredicted RBP6.64□□□□□ -1.35
ITGB1-208ENST00000464001 JAM3Q9BX67 310 aa6.64□□□□□ -1.35
ITGB1-208ENST00000464001 CDIP1Q9H305 208 aa6.64□□□□□ -1.35
ITGB1-208ENST00000464001 SMPD4Q9NXE4 827 aa6.64□□□□□ -1.35
ITGB1-208ENST00000464001 HSPBP1Q9NZL4 362 aa6.64□□□□□ -1.35
ITGB1-208ENST00000464001 NUB1Q9Y5A7 615 aa6.64□□□□□ -1.35
ITGB1-208ENST00000464001 ZNF536O15090 1300 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 PRODHO43272 600 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 MSCO60682 206 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 SURF1Q15526 300 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 NSMFQ6X4W1 530 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms