RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 DUSP9Q99956 384 aaKnown RBP10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 THAP9Q9H5L6 903 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 TBC1D7Q9P0N9 293 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 CTNND1O60716 968 aaKnown RBP10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 CASP14P31944 242 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 CYP4A11Q02928 519 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 MTMR2Q13614 643 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 HAUS3Q68CZ6 603 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 PRPF38AQ8NAV1 312 aaKnown RBP10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 ERMNQ8TAM6 284 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 HOOK2Q96ED9 719 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 FAM20AQ96MK3 541 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 SLF1Q9BQI6 1058 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 HOMER2Q9NSB8 354 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 PANK4Q9NVE7 773 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 CTDP1Q9Y5B0 961 aaPredicted RBP10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 RIOK3O14730 519 aaKnown RBP10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 TBX3O15119 743 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 CHMP2AO43633 222 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 PLA2G6O60733 806 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 FLOT1O75955 427 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 TPM1P09493 284 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 CIITAP33076 1130 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 PBX1P40424 430 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 SPP2Q13103 211 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 GPBP1Q86WP2 473 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 MYRIPQ8NFW9 859 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 ZKSCAN4Q969J2 545 aaPredicted RBP10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 GTPBP4Q9BZE4 634 aaKnown RBP10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 SEMA6BQ9H3T3 888 aa10.62□□□□□ -0.71
COL6A4P1-201ENST00000446690 ABCB11O95342 1321 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 LTBP3Q9NS15 1303 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 ARHGAP6O43182 974 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 CYP3A4P08684 503 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 ALAS1P13196 640 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 EEF1GP26641 437 aaKnown RBP10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 PPP1R2P41236 205 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 MTIF2P46199 727 aaKnown RBP10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 PSMC6P62333 389 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 SPIRE1Q08AE8 756 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 PABPC4Q13310 644 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 HYIQ5T013 277 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 NYAP1Q6ZVC0 841 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 TMEM139Q8IV31 216 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 SMAP1Q8IYB5 467 aaPredicted RBP10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 GLIS3Q8NEA6 775 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 RAVER2Q9HCJ3 691 aaKnown RBP10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 DNM3Q9UQ16 869 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 MYH7BA7E2Y1 1941 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 B4DLN1 442 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 WDR46O15213 610 aaKnown RBP10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 STX10O60499 249 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 ICAM1P05362 532 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 FXR1P51114 621 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 COASYQ13057 564 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 PRKG1Q13976 671 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 NOC3LQ8WTT2 800 aaKnown RBP10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 TSC1Q92574 1164 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 LPAR1Q92633 364 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 DNAJC19Q96DA6 116 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 CNOT6LQ96LI5 555 aaKnown RBP10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 WRNIP1Q96S55 665 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 TUBGCP2Q9BSJ2 902 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 WDR18Q9BV38 432 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 KIAA1683Q9H0B3 1180 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 EHMT1Q9H9B1 1298 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 KCND1Q9NSA2 647 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 PAXBP1Q9Y5B6 917 aa10.61□□□□□ -0.71
COL6A4P1-201ENST00000446690 IGLV3-22A0A075B6J6 115 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 EML1O00423 815 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 NFIBO00712 420 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 GYPCP04921 128 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 SPATA31C1P0DKV0 1188 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 ERCC3P19447 782 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 RPA1P27694 616 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 PSMD2Q13200 908 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 HERC4Q5GLZ8 1057 aaPredicted RBP10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 LRCH2Q5VUJ6 765 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 DCAF15Q66K64 600 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 TOGARAM2Q6ZUX3 1019 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 CCDC65Q8IXS2 484 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 MB21D1Q8N884 522 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 TRPM4Q8TD43 1214 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 PCMTD1Q96MG8 357 aaPredicted RBP10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 RPAP3Q9H6T3 665 aaPredicted RBP10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 PICK1Q9NRD5 415 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 RGL1Q9NZL6 768 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 FER1L6Q2WGJ9 1857 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 ARFGEF1Q9Y6D6 1849 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 ZNF536O15090 1300 aa10.6□□□□□ -0.71
COL6A4P1-201ENST00000446690 SOWAHDA6NJG2 315 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 CCP110O43303 1012 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 ZSCAN12O43309 604 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 MFAP3LO75121 409 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 CYP11B2P19099 503 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 VCAM1P19320 739 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 KCNJ6P48051 423 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 CTTNQ14247 550 aaKnown RBP10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 MTF1Q14872 753 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms