RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 RHPN2Q8IUC4 686 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 OR6B3Q8NGW1 331 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 FAM84BQ96KN1 310 aaPredicted RBP13.22□□□□□ -0.29
NEK1-201ENST00000439128 MOSPD1Q9UJG1 213 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 GDAQ9Y2T3 454 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 F5H6K3 240 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 CYP21A2P08686 494 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 RARBP10826 455 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 DDIT3P35638 169 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 KLRC3Q07444 240 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 ISCA1Q9BUE6 129 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 ZSWIM6Q9HCJ5 1215 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 TXNP10599 105 aaKnown RBP13.22□□□□□ -0.29
NEK1-201ENST00000439128 ANKRD13AQ8IZ07 590 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 BANK1Q8NDB2 785 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 FBF1Q8TES7 1133 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 SECISBP2LQ93073 1101 aaKnown RBP13.22□□□□□ -0.29
NEK1-201ENST00000439128 CEP95Q96GE4 821 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 HEXIM2Q96MH2 286 aaKnown RBP13.22□□□□□ -0.29
NEK1-201ENST00000439128 TOPORSQ9NS56 1045 aaPredicted RBP13.22□□□□□ -0.29
NEK1-201ENST00000439128 CD58P19256 250 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 MORC3Q14149 939 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 COG2Q14746 738 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 PEX26Q7Z412 305 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 CCDC105Q8IYK2 499 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 SH2B2O14492 632 aaPredicted RBP13.21□□□□□ -0.29
NEK1-201ENST00000439128 CAMTA2O94983 1202 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 TGFB2P61812 414 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 NUDT12Q9BQG2 462 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 CCDC68Q9H2F9 335 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 UTP11Q9Y3A2 253 aaKnown RBP13.21□□□□□ -0.29
NEK1-201ENST00000439128 KCNJ18B7U540 433 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 GTPBP6O43824 516 aaPredicted RBP13.21□□□□□ -0.29
NEK1-201ENST00000439128 ARHGAP4P98171 946 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 KCNJ12Q14500 433 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 LRRC41Q15345 812 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 MUM1L1Q5H9M0 696 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 HAUS1Q96CS2 278 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 TMEM47Q9BQJ4 181 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 NUCKS1Q9H1E3 243 aaKnown RBP13.21□□□□□ -0.29
NEK1-201ENST00000439128 CPVLQ9H3G5 476 aa13.21□□□□□ -0.29
NEK1-201ENST00000439128 IFNB1P01574 187 aa13.21□□□□□ -0.3
NEK1-201ENST00000439128 CTSHP09668 335 aa13.21□□□□□ -0.3
NEK1-201ENST00000439128 PSMC2P35998 433 aaKnown RBP13.21□□□□□ -0.3
NEK1-201ENST00000439128 TSPY1Q01534 308 aa13.21□□□□□ -0.3
NEK1-201ENST00000439128 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.3
NEK1-201ENST00000439128 SMC6Q96SB8 1091 aa13.21□□□□□ -0.3
NEK1-201ENST00000439128 WDR64B1ANS9 1081 aa13.21□□□□□ -0.3
NEK1-201ENST00000439128 ACTN4O43707 911 aaKnown RBP13.21□□□□□ -0.3
NEK1-201ENST00000439128 ZNF18P17022 549 aa13.21□□□□□ -0.3
NEK1-201ENST00000439128 VAV2P52735 878 aa13.21□□□□□ -0.3
NEK1-201ENST00000439128 PPP2R3AQ06190 1150 aa13.21□□□□□ -0.3
NEK1-201ENST00000439128 HS1BP3Q53T59 392 aa13.21□□□□□ -0.3
NEK1-201ENST00000439128 GCOM2Q9BZD3 368 aaPredicted RBP13.21□□□□□ -0.3
NEK1-201ENST00000439128 ADARB2Q9NS39 739 aaKnown RBP13.21□□□□□ -0.3
NEK1-201ENST00000439128 PAXBP1Q9Y5B6 917 aa13.21□□□□□ -0.3
NEK1-201ENST00000439128 C19orf81C9J6K1 198 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 RHOXF2BP0C7M4 288 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 GTF2A2P52657 109 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 PEX3P56589 373 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 SARNPP82979 210 aaKnown RBP13.2□□□□□ -0.3
NEK1-201ENST00000439128 AP3B2Q13367 1082 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 PRPSAP1Q14558 356 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 STRBPQ96SI9 672 aaKnown RBP13.2□□□□□ -0.3
NEK1-201ENST00000439128 RHOXF2Q9BQY4 288 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 DEFB129Q9H1M3 183 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 KDM4FA0A1W2PPD8 638 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 POLR2FP61218 127 aaKnown RBP13.2□□□□□ -0.3
NEK1-201ENST00000439128 SWSAP1Q6NVH7 229 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 TAOK1Q7L7X3 1001 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 DAAM2Q86T65 1068 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 DGKHQ86XP1 1220 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 ANAPC5Q9UJX4 755 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 SUGT1Q9Y2Z0 365 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 SURF1Q15526 300 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 GPRC5AQ8NFJ5 357 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 MAP4K1Q92918 833 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 ZBTB9Q96C00 473 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 PARVGQ9HBI0 331 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 GOLGA8IPA6NC78 632 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 GOLGA8JA6NMD2 632 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 NR2F2P24468 414 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 TRAPPC10P48553 1259 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 AFAP1L2Q8N4X5 818 aa13.2□□□□□ -0.3
NEK1-201ENST00000439128 DCP1AQ9NPI6 582 aaPredicted RBP13.2□□□□□ -0.3
NEK1-201ENST00000439128 NBPF26B4DH59 902 aa13.19□□□□□ -0.3
NEK1-201ENST00000439128 BPIFB4P59827 614 aa13.19□□□□□ -0.3
NEK1-201ENST00000439128 NBPF10Q6P3W6 841 aaKnown RBP13.19□□□□□ -0.3
NEK1-201ENST00000439128 TAB3Q8N5C8 712 aaPredicted RBP13.19□□□□□ -0.3
NEK1-201ENST00000439128 NBPF15Q8N660 670 aa13.19□□□□□ -0.3
NEK1-201ENST00000439128 RPAP1Q9BWH6 1393 aaPredicted RBP13.19□□□□□ -0.3
NEK1-201ENST00000439128 GOLGA8SH3BPF8 625 aa13.19□□□□□ -0.3
NEK1-201ENST00000439128 PRPF3O43395 683 aaKnown RBP13.19□□□□□ -0.3
NEK1-201ENST00000439128 NMT2O60551 498 aa13.19□□□□□ -0.3
NEK1-201ENST00000439128 HEXIM1O94992 359 aaKnown RBP13.19□□□□□ -0.3
NEK1-201ENST00000439128 TNFAIP2Q03169 654 aa13.19□□□□□ -0.3
NEK1-201ENST00000439128 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
NEK1-201ENST00000439128 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
NEK1-201ENST00000439128 MAPK6Q16659 721 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms