RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 SNAP25P60880 206 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 IKQ13123 557 aaPredicted RBP13.46□□□□□ -0.25
HDAC8-214ENST00000439122 SPA17Q15506 151 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 LONRF2Q1L5Z9 754 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 LRRC55Q6ZSA7 311 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 SH3BP5LQ7L8J4 393 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 IQCDQ96DY2 449 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 PNKPQ96T60 521 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 SIK3Q9Y2K2 1263 aa13.46□□□□□ -0.25
HDAC8-214ENST00000439122 POTEB3A0JP26 581 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 MACROD2A1Z1Q3 448 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 POTECB2RU33 542 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 APBA3O96018 575 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 ATP1A1P05023 1023 aaKnown RBP13.46□□□□□ -0.26
HDAC8-214ENST00000439122 USP11P51784 963 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 CDK17Q00537 523 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 FAM26FQ5R3K3 315 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 DACT2Q5SW24 774 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 POTEBQ6S5H4 581 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 ZNF662Q6ZS27 426 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 TRAPPC11Q7Z392 1133 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 IDI2Q9BXS1 227 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 FUT8Q9BYC5 575 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 PLAGL2Q9UPG8 496 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 SAR1BQ9Y6B6 198 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 DUSP10Q9Y6W6 482 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 ABCB11O95342 1321 aa13.46□□□□□ -0.26
HDAC8-214ENST00000439122 F5H6K3 240 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 TRAF5O00463 557 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 PLA2G4BP0C869 781 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 STAT3P40763 770 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 CACNB1Q02641 598 aaPredicted RBP13.45□□□□□ -0.26
HDAC8-214ENST00000439122 KLRC3Q07444 240 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 RAD51AP2Q09MP3 1159 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 KIF5AQ12840 1032 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 USH1GQ495M9 461 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 HYIQ5T013 277 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 KRT26Q7Z3Y9 468 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 SIAH1Q8IUQ4 282 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 GPIHBP1Q8IV16 184 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 NOA1Q8NC60 698 aaKnown RBP13.45□□□□□ -0.26
HDAC8-214ENST00000439122 MSANTD4Q8NCY6 345 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 MRIQ9BWK5 157 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 DEF6Q9H4E7 631 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 KCNMB3Q9NPA1 279 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 ARFGEF1Q9Y6D6 1849 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 NPHP3-ACAD11A0A0J9YXS1 232 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 MEIS2O14770 477 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 POLR3GO15318 223 aaPredicted RBP13.45□□□□□ -0.26
HDAC8-214ENST00000439122 SRGAP2O75044 1071 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 HOXA7P31268 230 aaPredicted RBP13.45□□□□□ -0.26
HDAC8-214ENST00000439122 FKBP3Q00688 224 aaKnown RBP13.45□□□□□ -0.26
HDAC8-214ENST00000439122 ABCB5Q2M3G0 1257 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 PRR16Q569H4 304 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 TMEM179Q6ZVK1 233 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 RRAGAQ7L523 313 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 GPBP1Q86WP2 473 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 CCDC65Q8IXS2 484 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 AMNQ9BXJ7 453 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 FGFBP2Q9BYJ0 223 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 RAB21Q9UL25 225 aa13.45□□□□□ -0.26
HDAC8-214ENST00000439122 H0YIN7 160 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 KRT18P05783 430 aaKnown RBP13.44□□□□□ -0.26
HDAC8-214ENST00000439122 VAV2P52735 878 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 ARHGAP4P98171 946 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 SMC1AQ14683 1233 aaKnown RBP13.44□□□□□ -0.26
HDAC8-214ENST00000439122 CCDC40Q4G0X9 1142 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 HERC4Q5GLZ8 1057 aaPredicted RBP13.44□□□□□ -0.26
HDAC8-214ENST00000439122 TATDN1Q6P1N9 297 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 NELFCDQ8IXH7 590 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 SLFN12Q8IYM2 578 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 CCDC155Q8N6L0 562 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 ZHX3Q9H4I2 956 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 ARHGAP20Q9P2F6 1191 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 COL4A3BPQ9Y5P4 624 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 SIPA1L1O43166 1804 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 CYP3A7-CYP3A51PA0A087WV96 503 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 LRRC53A6NM62 1247 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 ZNF263O14978 683 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 ERLIN1O75477 346 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 KIF20AO95235 890 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 CYP3A7P24462 503 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 HNRNPH3P31942 346 aaKnown RBP13.44□□□□□ -0.26
HDAC8-214ENST00000439122 HDLBPQ00341 1268 aaKnown RBP13.44□□□□□ -0.26
HDAC8-214ENST00000439122 AP3B2Q13367 1082 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 ZCWPW2Q504Y3 356 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 CACNA2D4Q7Z3S7 1137 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 FLAD1Q8NFF5 587 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 NEK11Q8NG66 645 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 HNRNPLLQ8WVV9 542 aaKnown RBP13.44□□□□□ -0.26
HDAC8-214ENST00000439122 SECISBP2LQ93073 1101 aaKnown RBP13.44□□□□□ -0.26
HDAC8-214ENST00000439122 CAPZA3Q96KX2 299 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 IFIH1Q9BYX4 1025 aaKnown RBP13.44□□□□□ -0.26
HDAC8-214ENST00000439122 TSGA10Q9BZW7 698 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
HDAC8-214ENST00000439122 SERPINA10Q9UK55 444 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 SCN9AQ15858 1988 aa13.44□□□□□ -0.26
HDAC8-214ENST00000439122 POTEFA5A3E0 1075 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 SPDYE3A6NKU9 549 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 MED24O75448 989 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms