RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 DNAJC6O75061 913 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 MYCLP1P12525 358 aaPredicted RBP5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 MASP1P48740 699 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 DNM2P50570 870 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 GALK1P51570 392 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 NEK4P51957 841 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 LACTBP83111 547 aaPredicted RBP5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 GPR19Q15760 415 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 ARHGAP44Q17R89 818 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 EMC4Q5J8M3 183 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 STEAP3Q658P3 488 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 ZC3H14Q6PJT7 736 aaKnown RBP5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 KIF18BQ86Y91 864 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 CABP5Q9NP86 173 aa5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 PPARGC1AQ9UBK2 798 aaKnown RBP5.39□□□□□ -1.55
LSM1P1-201ENST00000438629 ZC3H12DA2A288 527 aaKnown RBP5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 ZNF503-AS2A6NEH8 195 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 IRS4O14654 1257 aaPredicted RBP5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 TADA3O75528 432 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 CKMP06732 381 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 JMJD7P0C870 316 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 PYGMP11217 842 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 KCNA6P17658 529 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 SOX5P35711 763 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 CDCA2Q69YH5 1023 aaPredicted RBP5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 RPTNQ6XPR3 784 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 IGSF22Q8N9C0 903 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 ZCRB1Q8TBF4 217 aaKnown RBP5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 CHAC2Q8WUX2 184 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 TSPAN17Q96FV3 270 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 EPB41L4BQ9H329 900 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 CAAP1Q9H8G2 361 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 DCP1AQ9NPI6 582 aaPredicted RBP5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 SAMD15Q9P1V8 674 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 KLHL14Q9P2G3 628 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 DSEQ9UL01 958 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 ZNF652Q9Y2D9 606 aa5.38□□□□□ -1.55
LSM1P1-201ENST00000438629 ANKRD62A6NC57 917 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 LRRC10BA6NIK2 292 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 COL6A2P12110 1019 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 PRR5P85299 388 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 HABP4Q5JVS0 413 aaKnown RBP5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 TMEM132EQ6IEE7 984 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 ARHGAP36Q6ZRI8 547 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 KRT26Q7Z3Y9 468 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 MILR1Q7Z6M3 343 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 C2orf69Q8N8R5 385 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 UHMK1Q8TAS1 419 aaKnown RBP5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 PIP4K2CQ8TBX8 421 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 LIN37Q96GY3 246 aaPredicted RBP5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 ORAI3Q9BRQ5 295 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 NGRNQ9NPE2 291 aaKnown RBP5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 SIRT5Q9NXA8 310 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 FBLN5Q9UBX5 448 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 CARMIL2Q6F5E8 1435 aa5.37□□□□□ -1.55
LSM1P1-201ENST00000438629 A0A087X0B3 334 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 SGSM2O43147 1006 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 PDE8AO60658 829 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 PDE6AP16499 860 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 CPEP16870 476 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 IBSPP21815 317 aaPredicted RBP5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 SDHBP21912 280 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 SCNN1BP51168 640 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 ZNF460Q14592 562 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 TARBP2Q15633 366 aaKnown RBP5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 TMEM177Q53S58 311 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 CT47A1Q5JQC4 288 aaPredicted RBP5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 PIK3R6Q5UE93 754 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 DDX46Q7L014 1031 aaKnown RBP5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 OVCH1Q7RTY7 1134 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 FILIP1Q7Z7B0 1213 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 ZNF605Q86T29 641 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 OSTM1Q86WC4 334 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 TARS2Q9BW92 718 aaKnown RBP5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 NSUN3Q9H649 340 aaKnown RBP5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 IFT57Q9NWB7 429 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 PALD1Q9ULE6 856 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 ZKSCAN5Q9Y2L8 839 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 COQ6Q9Y2Z9 468 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 PCDHB4Q9Y5E5 795 aa5.36□□□□□ -1.55
LSM1P1-201ENST00000438629 GSG1L2A8MUP6 293 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 ZNF561-AS1K7EIQ3 104 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 VIL1P09327 827 aaKnown RBP5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 VIPR1P32241 457 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 GJA4P35212 333 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 STAT3P40763 770 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 SRSF3P84103 164 aaKnown RBP5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 SART3Q15020 963 aaKnown RBP5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 MLANAQ16655 118 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 PLEKHN1Q494U1 663 aaPredicted RBP5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 MCTP1Q6DN14 999 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 ZNF662Q6ZS27 426 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 CHST14Q8NCH0 376 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 FBXO15Q8NCQ5 510 aaPredicted RBP5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 ALG3Q92685 438 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 DIRC2Q96SL1 478 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 YIPF4Q9BSR8 244 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 PDGFDQ9GZP0 370 aaPredicted RBP5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 PCDH18Q9HCL0 1135 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms