RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 GALNT17Q6IS24 598 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 GJB7Q6PEY0 223 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 SLF2Q8IX21 1173 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 NAV1Q8NEY1 1877 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 CUL5Q93034 780 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 ERO1AQ96HE7 468 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 LZTS2Q9BRK4 669 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.31□□□□□ -0.92
CD44-208ENST00000428726 LUC7L2Q9Y383 392 aaKnown RBP9.31□□□□□ -0.92
CD44-208ENST00000428726 TISP43B9A030 160 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 ZBTB5O15062 677 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 ONECUT3O60422 494 aaPredicted RBP9.31□□□□□ -0.92
CD44-208ENST00000428726 TPM1P09493 284 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 CCDC40Q4G0X9 1142 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 ZC2HC1CQ53FD0 456 aaPredicted RBP9.31□□□□□ -0.92
CD44-208ENST00000428726 CCDC122Q5T0U0 273 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 ANKRD20A12PQ8NF67 263 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 AGBL1Q96MI9 1066 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 GAKO14976 1311 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 PNMA6FA0A0J9YX94 578 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 ZSCAN12O43309 604 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 UTP14CQ5TAP6 766 aaKnown RBP9.31□□□□□ -0.92
CD44-208ENST00000428726 PPP1R18Q6NYC8 613 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 MB21D1Q8N884 522 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 NOA1Q8NC60 698 aaKnown RBP9.31□□□□□ -0.92
CD44-208ENST00000428726 P2RX5Q93086 422 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 SPZ1Q9BXG8 430 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 ANO3Q9BYT9 981 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 BHMT2Q9H2M3 363 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 RWDD2AQ9UIY3 292 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 SAMM50Q9Y512 469 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 PCDHB13Q9Y5F0 798 aa9.31□□□□□ -0.92
CD44-208ENST00000428726 EML1O00423 815 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 CDR1P51861 262 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 STIM1Q13586 685 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 TMEM266Q2M3C6 531 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 SLC27A3Q5K4L6 730 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 TTI2Q6NXR4 508 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 DAGLBQ8NCG7 672 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 DEF6Q9H4E7 631 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 RIOX1Q9H6W3 641 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 JADE2Q9NQC1 790 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 KBTBD4Q9NVX7 518 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 REXO2Q9Y3B8 237 aaKnown RBP9.3□□□□□ -0.92
CD44-208ENST00000428726 HYOU1Q9Y4L1 999 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 MYH8P13535 1937 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 RASSF10A6NK89 507 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 STX10O60499 249 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 SOX10P56693 466 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 COG2Q14746 738 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 TSR1Q2NL82 804 aaKnown RBP9.3□□□□□ -0.92
CD44-208ENST00000428726 FAM163AQ96GL9 167 aaPredicted RBP9.3□□□□□ -0.92
CD44-208ENST00000428726 PANK4Q9NVE7 773 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 PI4KBQ9UBF8 816 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 TELO2Q9Y4R8 837 aa9.3□□□□□ -0.92
CD44-208ENST00000428726 SPDYE3A6NKU9 549 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 KIF5CO60282 957 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 ATP1A1P05023 1023 aaKnown RBP9.29□□□□□ -0.92
CD44-208ENST00000428726 CASP4P49662 377 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 ARHGAP4P98171 946 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 GFPT1Q06210 699 aaPredicted RBP9.29□□□□□ -0.92
CD44-208ENST00000428726 DLGAP5Q15398 846 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 WDR59Q6PJI9 974 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 TMCO3Q6UWJ1 677 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 BANK1Q8NDB2 785 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 BBXQ8WY36 941 aaPredicted RBP9.29□□□□□ -0.92
CD44-208ENST00000428726 CTAGE1Q96RT6 745 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 EPN1Q9Y6I3 576 aaPredicted RBP9.29□□□□□ -0.92
CD44-208ENST00000428726 SASH3O75995 380 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 MYBP10242 640 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 MYCLP12524 364 aaPredicted RBP9.29□□□□□ -0.92
CD44-208ENST00000428726 MRPL12P52815 198 aaKnown RBP9.29□□□□□ -0.92
CD44-208ENST00000428726 SLC7A5Q01650 507 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 CACNA2D4Q7Z3S7 1137 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 OGFOD1Q8N543 542 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 PARD6BQ9BYG5 372 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 PCIF1Q9H4Z3 704 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 RMND1Q9NWS8 449 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 UBR3Q6ZT12 1888 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 MEIS2O14770 477 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 MOCS3O95396 460 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 PLA2G4BP0C869 781 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 NMT1P30419 496 aaKnown RBP9.29□□□□□ -0.92
CD44-208ENST00000428726 POLR2FP61218 127 aaKnown RBP9.29□□□□□ -0.92
CD44-208ENST00000428726 FBXO11Q86XK2 927 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 CATSPER3Q86XQ3 398 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 PLCD3Q8N3E9 789 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 GIMAP8Q8ND71 665 aaPredicted RBP9.29□□□□□ -0.92
CD44-208ENST00000428726 ZNF668Q96K58 619 aaPredicted RBP9.29□□□□□ -0.92
CD44-208ENST00000428726 PRR12Q9ULL5 1215 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 FHOD1Q9Y613 1164 aa9.29□□□□□ -0.92
CD44-208ENST00000428726 ABCB11O95342 1321 aa9.28□□□□□ -0.92
CD44-208ENST00000428726 GOLGA6L9A6NEM1 432 aa9.28□□□□□ -0.92
CD44-208ENST00000428726 LAD1O00515 517 aa9.28□□□□□ -0.92
CD44-208ENST00000428726 N4BP1O75113 896 aaKnown RBP9.28□□□□□ -0.92
CD44-208ENST00000428726 KIF20AO95235 890 aa9.28□□□□□ -0.92
CD44-208ENST00000428726 NDUFA10O95299 355 aa9.28□□□□□ -0.92
CD44-208ENST00000428726 CALCAP01258 141 aa9.28□□□□□ -0.92
CD44-208ENST00000428726 BMP3P12645 472 aa9.28□□□□□ -0.92
CD44-208ENST00000428726 ALAS1P13196 640 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms