RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 ARHGAP6O43182 974 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 STX10O60499 249 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 CTNND1O60716 968 aaKnown RBP11.61□□□□□ -0.55
HDAC9-210ENST00000428307 GYPCP04921 128 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 FXR1P51114 621 aaKnown RBP eCLIP11.61□□□□□ -0.55
HDAC9-210ENST00000428307 MTMR2Q13614 643 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 HYIQ5T013 277 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 ANGEL2Q5VTE6 544 aaKnown RBP11.61□□□□□ -0.55
HDAC9-210ENST00000428307 ZKSCAN4Q969J2 545 aaPredicted RBP11.61□□□□□ -0.55
HDAC9-210ENST00000428307 TANGO6Q9C0B7 1094 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 LRRC27Q9C0I9 530 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 ZHX3Q9H4I2 956 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 THAP9Q9H5L6 903 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 KCND1Q9NSA2 647 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 CCPG1Q9ULG6 757 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 KIF13BQ9NQT8 1826 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 SMCHD1A6NHR9 2005 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 RNF225M0QZC1 329 aaPredicted RBP11.6□□□□□ -0.55
HDAC9-210ENST00000428307 TBX3O15119 743 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 NKRFO15226 690 aaKnown RBP eCLIP11.6□□□□□ -0.55
HDAC9-210ENST00000428307 PLA2G6O60733 806 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 CYP3A4P08684 503 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 ERCC3P19447 782 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 EEF1GP26641 437 aaKnown RBP11.6□□□□□ -0.55
HDAC9-210ENST00000428307 KCNJ6P48051 423 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 SPP2Q13103 211 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 PABPC4Q13310 644 aaKnown RBP eCLIP11.6□□□□□ -0.55
HDAC9-210ENST00000428307 MTF1Q14872 753 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 HAUS3Q68CZ6 603 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 GPBP1Q86WP2 473 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 PRPF38AQ8NAV1 312 aaKnown RBP11.6□□□□□ -0.55
HDAC9-210ENST00000428307 FAM20AQ96MK3 541 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 TUBGCP2Q9BSJ2 902 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 WDR18Q9BV38 432 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 HOMER2Q9NSB8 354 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 PANK4Q9NVE7 773 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 RGL1Q9NZL6 768 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 LTBP3Q9NS15 1303 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 IGLV3-22A0A075B6J6 115 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 B4DLN1 442 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 CHMP2AO43633 222 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 FLOT1O75955 427 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 SPATA31C1P0DKV0 1188 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 ARHGAP27Q6ZUM4 889 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 TOGARAM2Q6ZUX3 1019 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 ERMNQ8TAM6 284 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 HOOK2Q96ED9 719 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 SLF1Q9BQI6 1058 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 DESI2Q9BSY9 194 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 POLD4Q9HCU8 107 aa11.6□□□□□ -0.55
HDAC9-210ENST00000428307 ZNF536O15090 1300 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 SOWAHDA6NJG2 315 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 EML1O00423 815 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 NFIBO00712 420 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 KRT18P05783 430 aaKnown RBP11.59□□□□□ -0.55
HDAC9-210ENST00000428307 COASYQ13057 564 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 HERC4Q5GLZ8 1057 aaPredicted RBP11.59□□□□□ -0.55
HDAC9-210ENST00000428307 CENPPQ6IPU0 288 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 TRPM4Q8TD43 1214 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 CNOT6LQ96LI5 555 aaKnown RBP11.59□□□□□ -0.55
HDAC9-210ENST00000428307 FGFBP2Q9BYJ0 223 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 KIAA1683Q9H0B3 1180 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 RAVER2Q9HCJ3 691 aaKnown RBP11.59□□□□□ -0.55
HDAC9-210ENST00000428307 DNM3Q9UQ16 869 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.59□□□□□ -0.55
HDAC9-210ENST00000428307 WDR46O15213 610 aaKnown RBP11.59□□□□□ -0.55
HDAC9-210ENST00000428307 MFAP3LO75121 409 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 ICAM1P05362 532 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 TPM1P09493 284 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 ALAS1P13196 640 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 CYP11B2P19099 503 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 RPA1P27694 616 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 PPP1R2P41236 205 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 MTIF2P46199 727 aaKnown RBP11.59□□□□□ -0.55
HDAC9-210ENST00000428307 RBM10P98175 930 aaKnown RBP11.59□□□□□ -0.55
HDAC9-210ENST00000428307 EHHADHQ08426 723 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 ARSHQ5FYA8 562 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 SYT10Q6XYQ8 523 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 GUF1Q8N442 669 aaKnown RBP11.59□□□□□ -0.55
HDAC9-210ENST00000428307 MB21D1Q8N884 522 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 LPAR1Q92633 364 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 PANX2Q96RD6 677 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 WRNIP1Q96S55 665 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 GTPBP4Q9BZE4 634 aaKnown RBP11.59□□□□□ -0.55
HDAC9-210ENST00000428307 EMILIN3Q9NT22 766 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 VAV3Q9UKW4 847 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 PPP2R2CQ9Y2T4 447 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 PAXBP1Q9Y5B6 917 aa11.59□□□□□ -0.55
HDAC9-210ENST00000428307 LGALS16A8MUM7 142 aa11.58□□□□□ -0.56
HDAC9-210ENST00000428307 VCAM1P19320 739 aa11.58□□□□□ -0.56
HDAC9-210ENST00000428307 SLC12A3P55017 1021 aa11.58□□□□□ -0.56
HDAC9-210ENST00000428307 PRKG1Q13976 671 aa11.58□□□□□ -0.56
HDAC9-210ENST00000428307 CEP55Q53EZ4 464 aa11.58□□□□□ -0.56
HDAC9-210ENST00000428307 FAM26FQ5R3K3 315 aa11.58□□□□□ -0.56
HDAC9-210ENST00000428307 CNGA4Q8IV77 575 aa11.58□□□□□ -0.56
HDAC9-210ENST00000428307 KIF18AQ8NI77 898 aa11.58□□□□□ -0.56
HDAC9-210ENST00000428307 NOC3LQ8WTT2 800 aaKnown RBP11.58□□□□□ -0.56
HDAC9-210ENST00000428307 EIF2AK1Q9BQI3 630 aaKnown RBP11.58□□□□□ -0.56
HDAC9-210ENST00000428307 FER1L6Q2WGJ9 1857 aa11.58□□□□□ -0.56
HDAC9-210ENST00000428307 ABCB11O95342 1321 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms