RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 IFNKQ9P0W0 207 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 UNC13AQ9UPW8 1703 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 KIF14Q15058 1648 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 SEL1L2Q5TEA6 688 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 KHDRBS2Q5VWX1 349 aaKnown RBP8.39□□□□□ -1.07
LINC00649-203ENST00000427447 TMED8Q6PL24 325 aaPredicted RBP8.39□□□□□ -1.07
LINC00649-203ENST00000427447 TAF8Q7Z7C8 310 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 IFT122Q9HBG6 1241 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 NSMCE4AQ9NXX6 385 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 PKD2L2Q9NZM6 624 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 AMOTL2Q9Y2J4 779 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 SPEF1Q9Y4P9 236 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 PMS2P54278 862 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 PARP10Q53GL7 1025 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 TTLL11Q8NHH1 800 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 SLC10A4Q96EP9 437 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 IMPG2Q9BZV3 1241 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.39□□□□□ -1.07
LINC00649-203ENST00000427447 TMEM165Q9HC07 324 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 FAM135AQ9P2D6 1515 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 ARHGAP6O43182 974 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 WEE1P30291 646 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 MAGEA2P43356 314 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 QARSP47897 775 aaKnown RBP8.39□□□□□ -1.07
LINC00649-203ENST00000427447 VCPP55072 806 aaKnown RBP8.39□□□□□ -1.07
LINC00649-203ENST00000427447 FAM45BPQ6NSW5 357 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 ARHGEF18Q6ZSZ5 1173 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 NARS2Q96I59 477 aaKnown RBP8.39□□□□□ -1.07
LINC00649-203ENST00000427447 AKNAQ7Z591 1439 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 PDS5BQ9NTI5 1447 aa8.39□□□□□ -1.07
LINC00649-203ENST00000427447 UFL1O94874 794 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 MMRN1Q13201 1228 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 TRIM25Q14258 630 aaKnown RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 PATL1Q86TB9 770 aaKnown RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 CHD1LQ86WJ1 897 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 SPASTQ9UBP0 616 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 MYO18AQ92614 2054 aaKnown RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 EXTL3O43909 919 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 TOMM70O94826 608 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 TRIM23P36406 574 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 MCCD1P59942 119 aaPredicted RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 DNAJC3Q13217 504 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 MMEL1Q495T6 779 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 CCSAPQ6IQ19 270 aaPredicted RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 FAM133AQ8N9E0 248 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 APOL2Q9BQE5 337 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 TUBGCP2Q9BSJ2 902 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 MMADHCQ9H3L0 296 aaPredicted RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 KLHL1Q9NR64 748 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 GPN3Q9UHW5 284 aaPredicted RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 BAIAP2Q9UQB8 552 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 DCAF8L1A6NGE4 600 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 HSPA13P48723 471 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 OTUD5Q96G74 571 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 ABHD8Q96I13 439 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 RETREG1Q9H6L5 497 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 INTS9Q9NV88 658 aaKnown RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 PNMA8CA0A1B0GUJ8 204 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 ORC4O43929 436 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 XRCC5P13010 732 aaKnown RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 ATP6V1C2Q8NEY4 427 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 ENKURQ8TC29 256 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 ZC3H10Q96K80 434 aaKnown RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 KRT16P08779 473 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 TCP1P17987 556 aaKnown RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 BLOC1S2Q6QNY1 142 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 TTLL3Q9Y4R7 772 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 GNGT2O14610 69 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 NLRP6P59044 892 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 DEPDC1Q5TB30 811 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 XKR8Q9H6D3 395 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 PLEKHA5Q9HAU0 1116 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 TMED5Q9Y3A6 229 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 CYP19A1P11511 503 aaPredicted RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 KRT81Q14533 505 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 ACMSDQ8TDX5 336 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 KIFC2Q96AC6 838 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 SLC6A15Q9H2J7 730 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 TMEM5Q9Y2B1 443 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 M0R3G1 203 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 SDSP20132 328 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 KCNA3P22001 575 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 MTA1Q13330 715 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 RD3Q7Z3Z2 195 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 CADPS2Q86UW7 1296 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 ZBTB9Q96C00 473 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 PRPF18Q99633 342 aaKnown RBP8.38□□□□□ -1.07
LINC00649-203ENST00000427447 C12orf4Q9NQ89 552 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 COG6Q9Y2V7 657 aa8.38□□□□□ -1.07
LINC00649-203ENST00000427447 ZNF879B4DU55 563 aa8.37□□□□□ -1.07
LINC00649-203ENST00000427447 CTCFP49711 727 aaPredicted RBP8.37□□□□□ -1.07
LINC00649-203ENST00000427447 VWA3BQ502W6 1294 aa8.37□□□□□ -1.07
LINC00649-203ENST00000427447 SAV1Q9H4B6 383 aaPredicted RBP8.37□□□□□ -1.07
LINC00649-203ENST00000427447 SLFN14P0C7P3 912 aa8.37□□□□□ -1.07
LINC00649-203ENST00000427447 PSMC6P62333 389 aa8.37□□□□□ -1.07
LINC00649-203ENST00000427447 LGALS3BPQ08380 585 aa8.37□□□□□ -1.07
LINC00649-203ENST00000427447 IARS2Q9NSE4 1012 aaKnown RBP8.37□□□□□ -1.07
LINC00649-203ENST00000427447 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.37□□□□□ -1.07
LINC00649-203ENST00000427447 RPN1P04843 607 aaKnown RBP8.37□□□□□ -1.07
LINC00649-203ENST00000427447 IMPDH2P12268 514 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms