RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 OSBPL3Q9H4L5 887 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 CERS4Q9HA82 394 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 GRPEL1Q9HAV7 217 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 EPB41L4AQ9HCS5 686 aaPredicted RBP3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 CRTAC1Q9NQ79 661 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 ARHGEF4Q9NR80 690 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 UTP6Q9NYH9 597 aaKnown RBP3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 POGKQ9P215 609 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 LRP2BPQ9P2M1 347 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 ZNF112Q9UJU3 913 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 PADI4Q9UM07 663 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 MAGED2Q9UNF1 606 aaPredicted RBP3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 INVSQ9Y283 1065 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 MTF2Q9Y483 593 aaPredicted RBP3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 ATP6V0A2Q9Y487 856 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 PCDHB14Q9Y5E9 798 aa3.55□□□□□ -1.84
CTDSPL-203ENST00000416688 A0A087WV62 115 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 A0A1W2PQU0 124 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 CCDC66A2RUB6 948 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 CCDC69A6NI79 296 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 A6NLC8 198 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 TGFBR3LH3BV60 316 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 M0R2C6 588 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 FZD9O00144 591 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 PLOD2O00469 737 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 EREGO14944 169 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 ADAMTS3O15072 1205 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 AKR1B10O60218 316 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 MGEA5O60502 916 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 TSPAN3O60637 253 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 GAS7O60861 476 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 FKBP9O95302 570 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 HSPA4LO95757 839 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 STARD3NLO95772 234 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 CSTBP04080 98 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 FGFR1P11362 822 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 CES1P23141 567 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 ATP5DP30049 168 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 POLR2BP30876 1174 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 IL6STP40189 918 aaPredicted RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 MSH2P43246 934 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 DRG2P55039 364 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 HSD17B7P56937 341 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 SESN3P58005 492 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 AKAP17AQ02040 695 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 SCARB2Q14108 478 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 ZNF460Q14592 562 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 FAM98CQ17RN3 349 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 INF2Q27J81 1249 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 IZUMO3Q5VZ72 239 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 INTS3Q68E01 1043 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 FKBP9P1Q75LS8 142 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 RUFY3Q7L099 469 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 BRAPQ7Z569 592 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 PTRH1Q86Y79 214 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 DZIP1Q86YF9 867 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 EPHX4Q8IUS5 362 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 SLC44A2Q8IWA5 706 aaPredicted RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 CCDC144CPQ8IYA2 1237 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 TRMT44Q8IYL2 757 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 RTKN2Q8IZC4 609 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 KRT78Q8N1N4 520 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 ZNF527Q8NB42 609 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 ZMIZ2Q8NF64 920 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 TOR1AIP2Q8NFQ8 470 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 GRIN3AQ8TCU5 1115 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 BRSK1Q8TDC3 778 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 DIS3LQ8TF46 1054 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 KCTD13Q8WZ19 329 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 RUBCNQ92622 972 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 L3MBTL2Q969R5 705 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 ITFG2Q969R8 447 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 ZFRQ96KR1 1074 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 CCDC43Q96MW1 224 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 PPP1R16BQ96T49 567 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 TMEM60Q9H2L4 133 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 HPF1Q9NWY4 346 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 GPRC5BQ9NZH0 403 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 CABP1Q9NZU7 370 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 ORC3Q9UBD5 711 aaPredicted RBP3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 RASAL2Q9UJF2 1139 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 DUSP12Q9UNI6 340 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 ZKSCAN5Q9Y2L8 839 aa3.54□□□□□ -1.84
CTDSPL-203ENST00000416688 A0A1W2PP55 124 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 SOWAHBA6NEL2 793 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 GOLGA8CPA6NN73 597 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 MEIS3P2A8K0S8 358 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 ERVH48-1M5A8F1 160 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 MUSKO15146 869 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 MAN1A2O60476 641 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 TBX18O95935 607 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 PLATP00750 562 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 MT-ND3P03897 115 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 PABPC1P11940 636 aaKnown RBP3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 TNNT1P13805 278 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 ATP4AP20648 1035 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 ABCB4P21439 1286 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 TNFSF4P23510 183 aa3.53□□□□□ -1.84
CTDSPL-203ENST00000416688 ATP5F1P24539 256 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms