RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 SALL3Q9BXA9 1300 aa7.34□□□□□ -1.23
LMBR1-204ENST00000415428 TBC1D4O60343 1298 aa7.34□□□□□ -1.23
LMBR1-204ENST00000415428 PTGISQ16647 500 aa7.34□□□□□ -1.23
LMBR1-204ENST00000415428 ARNTL2Q8WYA1 636 aa7.34□□□□□ -1.23
LMBR1-204ENST00000415428 MUTYHQ9UIF7 546 aa7.34□□□□□ -1.23
LMBR1-204ENST00000415428 PA2G4Q9UQ80 394 aaKnown RBP7.34□□□□□ -1.23
LMBR1-204ENST00000415428 PNMA6EA0A0J9YXQ4 647 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 BMP3P12645 472 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 SMARCA1P28370 1054 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 RRP1P56182 461 aaKnown RBP7.33□□□□□ -1.24
LMBR1-204ENST00000415428 HIC1Q14526 733 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 DSC3Q14574 896 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 LCORLQ8N3X6 602 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 DTWD2Q8NBA8 298 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 SEPT8Q92599 483 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 ABCF2Q9UG63 623 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 TRPC6Q9Y210 931 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 GSG1L2A8MUP6 293 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 MTHFRP42898 656 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 TBC1D9Q6ZT07 1266 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 SENP7Q9BQF6 1050 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 C17orf80Q9BSJ5 609 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 WDR11Q9BZH6 1224 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 C1orf112Q9NSG2 853 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 RFXAPO00287 272 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 LILRB3O75022 631 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 CHRM1P11229 460 aaPredicted RBP7.33□□□□□ -1.24
LMBR1-204ENST00000415428 USP5P45974 858 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 STAT2P52630 851 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 CCDC85BQ15834 202 aaPredicted RBP7.33□□□□□ -1.24
LMBR1-204ENST00000415428 MAML2Q8IZL2 1156 aaPredicted RBP7.33□□□□□ -1.24
LMBR1-204ENST00000415428 NME8Q8N427 588 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 NKD2Q969F2 451 aaPredicted RBP7.33□□□□□ -1.24
LMBR1-204ENST00000415428 RMDN1Q96DB5 314 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 IL17RAQ96F46 866 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 MAP3K14Q99558 947 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 PPP1R12CQ9BZL4 782 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 CWC22Q9HCG8 908 aaKnown RBP7.33□□□□□ -1.24
LMBR1-204ENST00000415428 RNF146Q9NTX7 359 aa7.33□□□□□ -1.24
LMBR1-204ENST00000415428 USP15Q9Y4E8 981 aaPredicted RBP7.33□□□□□ -1.24
LMBR1-204ENST00000415428 TAF4O00268 1085 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 SLC30A4O14863 429 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 FOXP2O15409 715 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 NEUROD2Q15784 382 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 DGKDQ16760 1214 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 LINC01465Q8N7H1 131 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 DDX1Q92499 740 aaKnown RBP7.32□□□□□ -1.24
LMBR1-204ENST00000415428 PBXIP1Q96AQ6 731 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 MSANTD3Q96H12 275 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 SCLYQ96I15 445 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 SRGAP3O43295 1099 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 MICAL2O94851 1124 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 SRGAP2BP0DMP2 458 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 STOX1Q6ZVD7 989 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 OR6J1Q8NGC5 347 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 LINC01599Q8WXQ3 324 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 CASP10Q92851 521 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 IGSF9Q9P2J2 1179 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 IGKV6D-21A0A0A0MT36 114 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 PIK3CDO00329 1044 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 MFSD10Q14728 455 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 RAB3GAP1Q15042 981 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 SYCE2Q6PIF2 218 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 LSM14AQ8ND56 463 aaKnown RBP7.32□□□□□ -1.24
LMBR1-204ENST00000415428 PPP2R3CQ969Q6 453 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 TRERF1Q96PN7 1200 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 ZNF532Q9HCE3 1301 aa7.32□□□□□ -1.24
LMBR1-204ENST00000415428 EIF3JO75822 258 aaKnown RBP7.31□□□□□ -1.24
LMBR1-204ENST00000415428 AKAP3O75969 853 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 C7P10643 843 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 WEE1P30291 646 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 G3BP1Q13283 466 aaKnown RBP eCLIP7.31□□□□□ -1.24
LMBR1-204ENST00000415428 MTMR3Q13615 1198 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 CCDC178Q5BJE1 867 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 CELF3Q5SZQ8 465 aaKnown RBP7.31□□□□□ -1.24
LMBR1-204ENST00000415428 TAF2Q6P1X5 1199 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 C15orf39Q6ZRI6 1047 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 CWH43Q9H720 699 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 FBXO28Q9NVF7 368 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 PRR12Q9ULL5 1215 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 PCDHGC5Q9Y5F6 944 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 MED19A0JLT2 244 aaPredicted RBP7.31□□□□□ -1.24
LMBR1-204ENST00000415428 DNAJB1P25685 340 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 BEX3Q00994 111 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 ZNF618Q5T7W0 954 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 TSHZ1Q6ZSZ6 1077 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 CCER1Q8TC90 406 aaPredicted RBP7.31□□□□□ -1.24
LMBR1-204ENST00000415428 WNT8BQ93098 351 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 NGRNQ9NPE2 291 aaKnown RBP7.31□□□□□ -1.24
LMBR1-204ENST00000415428 ZHX1Q9UKY1 873 aaPredicted RBP7.31□□□□□ -1.24
LMBR1-204ENST00000415428 DOCK5Q9H7D0 1870 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 LAMA3Q16787 3333 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 SOBPA7XYQ1 873 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 LMNAP02545 664 aaKnown RBP7.31□□□□□ -1.24
LMBR1-204ENST00000415428 CNTN2Q02246 1040 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 LMNB2Q03252 620 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 MUM1L1Q5H9M0 696 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 KRT40Q6A162 431 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 RGS18Q9NS28 235 aa7.31□□□□□ -1.24
LMBR1-204ENST00000415428 MYO16Q9Y6X6 1858 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms