RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 COASYQ13057 564 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 NCAPH2Q6IBW4 605 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 SYT10Q6XYQ8 523 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 TOGARAM2Q6ZUX3 1019 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 DNAJC19Q96DA6 116 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 UIMC1Q96RL1 719 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 SEMA6BQ9H3T3 888 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 PPP1R1BQ9UD71 204 aaPredicted RBP16.67■□□□□ 0.26
CBX3-202ENST00000396386 E9PMD0 336 aa16.66■□□□□ 0.26
CBX3-202ENST00000396386 PES1O00541 588 aaKnown RBP16.66■□□□□ 0.26
CBX3-202ENST00000396386 MED24O75448 989 aa16.66■□□□□ 0.26
CBX3-202ENST00000396386 CFBP00751 764 aa16.66■□□□□ 0.26
CBX3-202ENST00000396386 PLA2G4BP0C869 781 aa16.66■□□□□ 0.26
CBX3-202ENST00000396386 PRKCSHP14314 528 aaPredicted RBP16.66■□□□□ 0.26
CBX3-202ENST00000396386 DNM2P50570 870 aa16.66■□□□□ 0.26
CBX3-202ENST00000396386 ETF1P62495 437 aaKnown RBP16.66■□□□□ 0.26
CBX3-202ENST00000396386 LRRC63Q05C16 580 aa16.66■□□□□ 0.26
CBX3-202ENST00000396386 GPBP1Q86WP2 473 aa16.66■□□□□ 0.26
CBX3-202ENST00000396386 TUBGCP2Q9BSJ2 902 aa16.66■□□□□ 0.26
CBX3-202ENST00000396386 ZNF341Q9BYN7 854 aa16.66■□□□□ 0.26
CBX3-202ENST00000396386 GLIS2Q9BZE0 524 aaPredicted RBP16.66■□□□□ 0.26
CBX3-202ENST00000396386 SOWAHDA6NJG2 315 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 FGFR1OPO95684 399 aaKnown RBP16.65■□□□□ 0.26
CBX3-202ENST00000396386 MTIF2P46199 727 aaKnown RBP16.65■□□□□ 0.26
CBX3-202ENST00000396386 FOXR2Q6PJQ5 311 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 CCDC65Q8IXS2 484 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 ZNF507Q8TCN5 953 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 ABHD10Q9NUJ1 306 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 PANK4Q9NVE7 773 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 POTEFA5A3E0 1075 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 PHF20L1A8MW92 1017 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 B4DLN1 442 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 MSH4O15457 936 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 CCDC175P0C221 793 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 POTEIP0CG38 1075 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 FAM26FQ5R3K3 315 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 POTEGQ6S5H5 508 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 POTEEQ6S8J3 1075 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 CCDC84Q86UT8 332 aaPredicted RBP16.65■□□□□ 0.26
CBX3-202ENST00000396386 TEPSINQ96N21 525 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 TSG101Q99816 390 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 VAV3Q9UKW4 847 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 BCS1LQ9Y276 419 aa16.65■□□□□ 0.26
CBX3-202ENST00000396386 WDR46O15213 610 aaKnown RBP16.64■□□□□ 0.25
CBX3-202ENST00000396386 RPA1P27694 616 aa16.64■□□□□ 0.25
CBX3-202ENST00000396386 RBM10P98175 930 aaKnown RBP16.64■□□□□ 0.25
CBX3-202ENST00000396386 RAD9BQ6WBX8 426 aa16.64■□□□□ 0.25
CBX3-202ENST00000396386 MICALL2Q8IY33 904 aa16.64■□□□□ 0.25
CBX3-202ENST00000396386 MYOCDQ8IZQ8 938 aa16.64■□□□□ 0.25
CBX3-202ENST00000396386 TSC1Q92574 1164 aa16.64■□□□□ 0.25
CBX3-202ENST00000396386 DESI2Q9BSY9 194 aa16.64■□□□□ 0.25
CBX3-202ENST00000396386 FBXO28Q9NVF7 368 aa16.64■□□□□ 0.25
CBX3-202ENST00000396386 CD2APQ9Y5K6 639 aa16.64■□□□□ 0.25
CBX3-202ENST00000396386 LOXHD1Q8IVV2 1947 aa16.64■□□□□ 0.25
CBX3-202ENST00000396386 PARP14Q460N5 1801 aa16.64■□□□□ 0.25
CBX3-202ENST00000396386 IGLV3-22A0A075B6J6 115 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 KRT18P05783 430 aaKnown RBP16.63■□□□□ 0.25
CBX3-202ENST00000396386 GMPSP49915 693 aaPredicted RBP16.63■□□□□ 0.25
CBX3-202ENST00000396386 MTF1Q14872 753 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 SYCP1Q15431 976 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
CBX3-202ENST00000396386 LDHDQ86WU2 507 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 TMTC1Q8IUR5 882 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 LPAR1Q92633 364 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 PITPNM2Q9BZ72 1349 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 EGFRP00533 1210 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 CYP11B2P19099 503 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 KRT9P35527 623 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 PTGER2P43116 358 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 SLC12A3P55017 1021 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 RASSF7Q02833 373 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 TRIM65Q6PJ69 517 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 CATSPER3Q86XQ3 398 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 NOC4LQ9BVI4 516 aaKnown RBP16.63■□□□□ 0.25
CBX3-202ENST00000396386 DNAI1Q9UI46 699 aa16.63■□□□□ 0.25
CBX3-202ENST00000396386 ICAM1P05362 532 aa16.62■□□□□ 0.25
CBX3-202ENST00000396386 KIF4BQ2VIQ3 1234 aa16.62■□□□□ 0.25
CBX3-202ENST00000396386 FKBP15Q5T1M5 1219 aa16.62■□□□□ 0.25
CBX3-202ENST00000396386 CYP26C1Q6V0L0 522 aa16.62■□□□□ 0.25
CBX3-202ENST00000396386 SLF1Q9BQI6 1058 aa16.62■□□□□ 0.25
CBX3-202ENST00000396386 WDR18Q9BV38 432 aa16.62■□□□□ 0.25
CBX3-202ENST00000396386 KIAA1683Q9H0B3 1180 aa16.62■□□□□ 0.25
CBX3-202ENST00000396386 CCPG1Q9ULG6 757 aa16.62■□□□□ 0.25
CBX3-202ENST00000396386 SCAF8Q9UPN6 1271 aaKnown RBP16.62■□□□□ 0.25
CBX3-202ENST00000396386 ADGRG1Q9Y653 693 aa16.62■□□□□ 0.25
CBX3-202ENST00000396386 FRMD3A2A2Y4 597 aa16.61■□□□□ 0.25
CBX3-202ENST00000396386 KIF20AO95235 890 aa16.61■□□□□ 0.25
CBX3-202ENST00000396386 SPATA31C1P0DKV0 1188 aa16.61■□□□□ 0.25
CBX3-202ENST00000396386 TBC1D8BQ0IIM8 1120 aa16.61■□□□□ 0.25
CBX3-202ENST00000396386 LRRC41Q15345 812 aa16.61■□□□□ 0.25
CBX3-202ENST00000396386 MIIPQ5JXC2 388 aa16.61■□□□□ 0.25
CBX3-202ENST00000396386 MTERF4Q7Z6M4 381 aaKnown RBP16.61■□□□□ 0.25
CBX3-202ENST00000396386 CYP2W1Q8TAV3 490 aa16.61■□□□□ 0.25
CBX3-202ENST00000396386 TBC1D5Q92609 795 aa16.61■□□□□ 0.25
CBX3-202ENST00000396386 EEF2KMTQ96G04 330 aa16.61■□□□□ 0.25
CBX3-202ENST00000396386 MAP7D2Q96T17 732 aa16.61■□□□□ 0.25
CBX3-202ENST00000396386 POLR3CQ9BUI4 534 aaPredicted RBP16.61■□□□□ 0.25
CBX3-202ENST00000396386 NUP58Q9BVL2 599 aa16.61■□□□□ 0.25
CBX3-202ENST00000396386 L2HGDHQ9H9P8 463 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms