RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 PTGER2P43116 358 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 NCAPH2Q6IBW4 605 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 LDHDQ86WU2 507 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 SEMA6BQ9H3T3 888 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 ABCB11O95342 1321 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 CASP14P31944 242 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 INPP5BP32019 993 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 UBXN1Q04323 297 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 PSMD2Q13200 908 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 KIF4BQ2VIQ3 1234 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 CENPPQ6IPU0 288 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 ERMNQ8TAM6 284 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 DEFB129Q9H1M3 183 aa20.29■□□□□ 0.84
ACTN4-202ENST00000390009 IGLV3-22A0A075B6J6 115 aa20.28■□□□□ 0.84
ACTN4-202ENST00000390009 LGALS16A8MUM7 142 aa20.28■□□□□ 0.84
ACTN4-202ENST00000390009 CTNND1O60716 968 aaKnown RBP20.28■□□□□ 0.84
ACTN4-202ENST00000390009 PLA2G4BP0C869 781 aa20.28■□□□□ 0.84
ACTN4-202ENST00000390009 HOXA7P31268 230 aaPredicted RBP20.28■□□□□ 0.84
ACTN4-202ENST00000390009 CATSPER3Q86XQ3 398 aa20.28■□□□□ 0.84
ACTN4-202ENST00000390009 GUF1Q8N442 669 aaKnown RBP20.28■□□□□ 0.84
ACTN4-202ENST00000390009 EEF2KMTQ96G04 330 aa20.28■□□□□ 0.84
ACTN4-202ENST00000390009 BMP2KQ9NSY1 1161 aaPredicted RBP20.28■□□□□ 0.84
ACTN4-202ENST00000390009 POTEFA5A3E0 1075 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 WDR46O15213 610 aaKnown RBP20.27■□□□□ 0.84
ACTN4-202ENST00000390009 TPM1P09493 284 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 POTEIP0CG38 1075 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 FXR1P51114 621 aaKnown RBP eCLIP20.27■□□□□ 0.843e-7■■■■□ 19.8
ACTN4-202ENST00000390009 COASYQ13057 564 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 POTEGQ6S5H5 508 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 POTEEQ6S8J3 1075 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 CNGA4Q8IV77 575 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 FAM114A1Q8IWE2 563 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 LPAR1Q92633 364 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 KIAA1683Q9H0B3 1180 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 GINM1Q9NU53 330 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 VAV3Q9UKW4 847 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 DOCK1Q14185 1865 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 UTRNP46939 3433 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 RPA1P27694 616 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 CNOT6LQ96LI5 555 aaKnown RBP20.27■□□□□ 0.84
ACTN4-202ENST00000390009 PANK4Q9NVE7 773 aa20.27■□□□□ 0.84
ACTN4-202ENST00000390009 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.83
ACTN4-202ENST00000390009 ZSCAN12O43309 604 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 ICAM1P05362 532 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 TRIM14Q14142 442 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 GPBP1Q86WP2 473 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 MB21D1Q8N884 522 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 NLGN2Q8NFZ4 835 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 ZNF507Q8TCN5 953 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 TUBGCP2Q9BSJ2 902 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 EHMT1Q9H9B1 1298 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 PPP2R2CQ9Y2T4 447 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 STK24Q9Y6E0 443 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 SPATA31C1P0DKV0 1188 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 NBPF12Q5TAG4 269 aaPredicted RBP20.26■□□□□ 0.83
ACTN4-202ENST00000390009 REXO1L1PQ8IX06 675 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 PRPF38AQ8NAV1 312 aaKnown RBP20.26■□□□□ 0.83
ACTN4-202ENST00000390009 KIF18AQ8NI77 898 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 CCDC51Q96ER9 411 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 AGBL1Q96MI9 1066 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 SLF1Q9BQI6 1058 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 WDR18Q9BV38 432 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 NAA15Q9BXJ9 866 aaKnown RBP20.26■□□□□ 0.83
ACTN4-202ENST00000390009 CCPG1Q9ULG6 757 aa20.26■□□□□ 0.83
ACTN4-202ENST00000390009 ZNF536O15090 1300 aa20.25■□□□□ 0.83
ACTN4-202ENST00000390009 A0A1W2PQC6 194 aa20.25■□□□□ 0.83
ACTN4-202ENST00000390009 PES1O00541 588 aaKnown RBP20.25■□□□□ 0.83
ACTN4-202ENST00000390009 CYP11B2P19099 503 aa20.25■□□□□ 0.83
ACTN4-202ENST00000390009 SLC12A3P55017 1021 aa20.25■□□□□ 0.83
ACTN4-202ENST00000390009 UBXN2AP68543 259 aa20.25■□□□□ 0.83
ACTN4-202ENST00000390009 DGKZQ13574 1117 aa20.25■□□□□ 0.83
ACTN4-202ENST00000390009 TOGARAM2Q6ZUX3 1019 aa20.25■□□□□ 0.83
ACTN4-202ENST00000390009 GLIS3Q8NEA6 775 aa20.25■□□□□ 0.83
ACTN4-202ENST00000390009 PKNOX2Q96KN3 472 aa20.25■□□□□ 0.83
ACTN4-202ENST00000390009 LRRC41Q15345 812 aa20.24■□□□□ 0.83
ACTN4-202ENST00000390009 FAM26FQ5R3K3 315 aa20.24■□□□□ 0.83
ACTN4-202ENST00000390009 CCDC65Q8IXS2 484 aa20.24■□□□□ 0.83
ACTN4-202ENST00000390009 RBBP6Q7Z6E9 1792 aaKnown RBP20.24■□□□□ 0.83
ACTN4-202ENST00000390009 SOWAHDA6NJG2 315 aa20.24■□□□□ 0.83
ACTN4-202ENST00000390009 TUBB4AP04350 444 aa20.24■□□□□ 0.83
ACTN4-202ENST00000390009 DNM2P50570 870 aa20.24■□□□□ 0.83
ACTN4-202ENST00000390009 LRRC63Q05C16 580 aa20.24■□□□□ 0.83
ACTN4-202ENST00000390009 DNM3Q9UQ16 869 aa20.24■□□□□ 0.83
ACTN4-202ENST00000390009 NPHP3-ACAD11A0A0J9YXS1 232 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 B4DLN1 442 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 MEIS1O00470 390 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 MTIF2P46199 727 aaKnown RBP20.23■□□□□ 0.83
ACTN4-202ENST00000390009 PSMC6P62333 389 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 MYOCDQ8IZQ8 938 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 HOOK2Q96ED9 719 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 RNF225M0QZC1 329 aaPredicted RBP20.23■□□□□ 0.83
ACTN4-202ENST00000390009 EML1O00423 815 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 FECHP22830 423 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 HSD17B4P51659 736 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 CACNB1Q02641 598 aaPredicted RBP20.23■□□□□ 0.83
ACTN4-202ENST00000390009 MTMR2Q13614 643 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 MTF1Q14872 753 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 ARSHQ5FYA8 562 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 DCAF15Q66K64 600 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 SYT10Q6XYQ8 523 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms