RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 GOLGA8MH3BSY2 632 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 FGAP02671 866 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 TFAMQ00059 246 aaKnown RBP16.82■□□□□ 0.28
ALK-201ENST00000389048 GSPT2Q8IYD1 628 aaKnown RBP16.82■□□□□ 0.28
ALK-201ENST00000389048 CHURC1Q8WUH1 139 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 GRAMD1BQ3KR37 738 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 ZNF577Q9BSK1 485 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 N4BP1O75113 896 aaKnown RBP16.81■□□□□ 0.28
ALK-201ENST00000389048 MT-ND3P03897 115 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 MARK3P27448 753 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 BLVRAP53004 296 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 ICA1Q05084 483 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 TBC1D1Q86TI0 1168 aaPredicted RBP16.81■□□□□ 0.28
ALK-201ENST00000389048 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
ALK-201ENST00000389048 GDF11O95390 407 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 PDHA1P08559 390 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 HAUS4Q9H6D7 363 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 MLXIPLQ9NP71 852 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 ECEL1O95672 775 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 ZNF18P17022 549 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 DAB2P98082 770 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 FBXL13Q8NEE6 735 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 COL4A3BPQ9Y5P4 624 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 CMA1P23946 247 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 PCGF5Q86SE9 256 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 ANKRD36BP1Q96IX9 119 aa16.81■□□□□ 0.28
ALK-201ENST00000389048 TTLL7Q6ZT98 887 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 MED4Q9NPJ6 270 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 INO80B-WBP1J3KQ70 363 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 SYF2O95926 243 aaKnown RBP16.8■□□□□ 0.28
ALK-201ENST00000389048 DYNLL1P63167 89 aaKnown RBP16.8■□□□□ 0.28
ALK-201ENST00000389048 LRRC23Q53EV4 343 aaPredicted RBP16.8■□□□□ 0.28
ALK-201ENST00000389048 PRPF38AQ8NAV1 312 aaKnown RBP16.8■□□□□ 0.28
ALK-201ENST00000389048 INO80BQ9C086 356 aaPredicted RBP16.8■□□□□ 0.28
ALK-201ENST00000389048 SAMSN1Q9NSI8 373 aaKnown RBP16.8■□□□□ 0.28
ALK-201ENST00000389048 MRPL11Q9Y3B7 192 aaKnown RBP16.8■□□□□ 0.28
ALK-201ENST00000389048 PDIA3P30101 505 aaKnown RBP16.8■□□□□ 0.28
ALK-201ENST00000389048 IL13P35225 146 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 NT5C1BQ96P26 610 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 SNX25Q9H3E2 840 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 SPC25Q9HBM1 224 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 LARSQ9P2J5 1176 aaKnown RBP16.8■□□□□ 0.28
ALK-201ENST00000389048 DENND4BO75064 1496 aaPredicted RBP16.8■□□□□ 0.28
ALK-201ENST00000389048 AOX1Q06278 1338 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 MCF2LO15068 1137 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 PFKFB2O60825 505 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 NCLNQ969V3 563 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 ERFP50548 548 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 KCNA1Q09470 495 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 OR6B2Q6IFH4 312 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 GCNT4Q9P109 453 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 SCOCQ9UIL1 159 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 MAN1B1Q9UKM7 699 aa16.8■□□□□ 0.28
ALK-201ENST00000389048 A0A0G2JND7 137 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 SFI1A8K8P3 1242 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 APBA3O96018 575 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 ESRRGP62508 458 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 ZNF274Q96GC6 653 aaPredicted RBP16.79■□□□□ 0.28
ALK-201ENST00000389048 NHEJ1Q9H9Q4 299 aaPredicted RBP16.79■□□□□ 0.28
ALK-201ENST00000389048 TLK1Q9UKI8 766 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 UBE2SQ16763 222 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 SLFN13Q68D06 897 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 ORAI2Q96SN7 254 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 IWS1Q96ST2 819 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 KMT5AQ9NQR1 393 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 CDC23Q9UJX2 597 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 NOC2LQ9Y3T9 749 aaKnown RBP16.79■□□□□ 0.28
ALK-201ENST00000389048 PCDHA1Q9Y5I3 950 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 AFPP02771 609 aaKnown RBP16.79■□□□□ 0.28
ALK-201ENST00000389048 POLR2BP30876 1174 aaKnown RBP16.79■□□□□ 0.28
ALK-201ENST00000389048 SSTR3P32745 418 aaPredicted RBP16.79■□□□□ 0.28
ALK-201ENST00000389048 BBS9Q3SYG4 887 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 COA7Q96BR5 231 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 SRGAP2O75044 1071 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 PDE6AP16499 860 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 ATP5JP18859 108 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 OCRLQ01968 901 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 BBOF1Q8ND07 529 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
ALK-201ENST00000389048 TRAIPQ9BWF2 469 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 MOSPD1Q9UJG1 213 aa16.79■□□□□ 0.28
ALK-201ENST00000389048 POLR3CQ9BUI4 534 aaPredicted RBP16.78■□□□□ 0.28
ALK-201ENST00000389048 ITM2BQ9Y287 266 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 PCDHA5Q9Y5H7 936 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 EXOC1LA0A1B0GW35 172 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 SRGAP2BP0DMP2 458 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 HADHAP40939 763 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 ARHGDIAP52565 204 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 PARD6BQ9BYG5 372 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 ZBTB17Q13105 803 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 ZC3H18Q86VM9 953 aaKnown RBP16.78■□□□□ 0.28
ALK-201ENST00000389048 PUS3Q9BZE2 481 aaKnown RBP16.78■□□□□ 0.28
ALK-201ENST00000389048 AS3MTQ9HBK9 375 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 DNAJC8O75937 253 aaPredicted RBP16.78■□□□□ 0.28
ALK-201ENST00000389048 GUCY2CP25092 1073 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 CCDC85BQ15834 202 aaPredicted RBP16.78■□□□□ 0.28
ALK-201ENST00000389048 HIBCHQ6NVY1 386 aaPredicted RBP16.78■□□□□ 0.28
ALK-201ENST00000389048 RWDD4Q6NW29 188 aaKnown RBP16.78■□□□□ 0.28
ALK-201ENST00000389048 ELAC2Q9BQ52 826 aaKnown RBP16.78■□□□□ 0.28
ALK-201ENST00000389048 SUGT1Q9Y2Z0 365 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms