RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 B4DLN1 442 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 TPM1P09493 284 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 INPP5BP32019 993 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 RBM10P98175 930 aaKnown RBP13.39□□□□□ -0.27
USP3-202ENST00000380324 MAP3K10Q02779 954 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 COASYQ13057 564 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 HYIQ5T013 277 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 GPBP1Q86WP2 473 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 LDHDQ86WU2 507 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 LRRC27Q9C0I9 530 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 SEMA6BQ9H3T3 888 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 FEM1BQ9UK73 627 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 PPP2R2CQ9Y2T4 447 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 PAXBP1Q9Y5B6 917 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 LGALS16A8MUM7 142 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 TRAF1Q13077 416 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 SYT10Q6XYQ8 523 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 CATSPER3Q86XQ3 398 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 CNGA4Q8IV77 575 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 DNAJC19Q96DA6 116 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 PANX2Q96RD6 677 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 SGIP1Q9BQI5 828 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 TUBGCP2Q9BSJ2 902 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 DEFB129Q9H1M3 183 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 CCPG1Q9ULG6 757 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 CD2APQ9Y5K6 639 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 DOCK1Q14185 1865 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 TBX3O15119 743 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 CCP110O43303 1012 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 CHMP2AO43633 222 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 KRT18P05783 430 aaKnown RBP13.38□□□□□ -0.27
USP3-202ENST00000380324 ERCC3P19447 782 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 CIITAP33076 1130 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 GTF2F1P35269 517 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP3-202ENST00000380324 PPP1R2P41236 205 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 KIF18AQ8NI77 898 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 ERMNQ8TAM6 284 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 NOC3LQ8WTT2 800 aaKnown RBP13.38□□□□□ -0.27
USP3-202ENST00000380324 WDR18Q9BV38 432 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 ZHX3Q9H4I2 956 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 HOMER2Q9NSB8 354 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 PANK4Q9NVE7 773 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 FZD1Q9UP38 647 aa13.38□□□□□ -0.27
USP3-202ENST00000380324 MRPL11Q9Y3B7 192 aaKnown RBP13.38□□□□□ -0.27
USP3-202ENST00000380324 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP3-202ENST00000380324 RBBP6Q7Z6E9 1792 aaKnown RBP13.37□□□□□ -0.27
USP3-202ENST00000380324 ABCB11O95342 1321 aa13.37□□□□□ -0.27
USP3-202ENST00000380324 IGLV3-22A0A075B6J6 115 aa13.37□□□□□ -0.27
USP3-202ENST00000380324 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.276e-7■■□□□ 13.1
USP3-202ENST00000380324 MTIF2P46199 727 aaKnown RBP13.37□□□□□ -0.27
USP3-202ENST00000380324 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.279e-6■■■■□ 24.7
USP3-202ENST00000380324 MTMR2Q13614 643 aa13.37□□□□□ -0.27
USP3-202ENST00000380324 NBPF12Q5TAG4 269 aaPredicted RBP13.37□□□□□ -0.27
USP3-202ENST00000380324 PRAMEF18Q5VWM3 479 aa13.37□□□□□ -0.27
USP3-202ENST00000380324 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
USP3-202ENST00000380324 HOOK2Q96ED9 719 aa13.37□□□□□ -0.27
USP3-202ENST00000380324 FAM20AQ96MK3 541 aa13.37□□□□□ -0.27
USP3-202ENST00000380324 FGFBP2Q9BYJ0 223 aa13.37□□□□□ -0.27
USP3-202ENST00000380324 GTPBP4Q9BZE4 634 aaKnown RBP13.37□□□□□ -0.27
USP3-202ENST00000380324 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
USP3-202ENST00000380324 VAV3Q9UKW4 847 aa13.37□□□□□ -0.27
USP3-202ENST00000380324 RNF225M0QZC1 329 aaPredicted RBP13.36□□□□□ -0.27
USP3-202ENST00000380324 KIF2AO00139 706 aaPredicted RBP13.36□□□□□ -0.27
USP3-202ENST00000380324 FZD9O00144 591 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 ZSCAN12O43309 604 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 PSMC6P62333 389 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 EHHADHQ08426 723 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 FAM26FQ5R3K3 315 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 FAM114A1Q8IWE2 563 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 MB21D1Q8N884 522 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 SLF1Q9BQI6 1058 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 ABHD10Q9NUJ1 306 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 LTBP3Q9NS15 1303 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 PLA2G6O60733 806 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 CYP3A4P08684 503 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 SPATA31C1P0DKV0 1188 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 CYP11B2P19099 503 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 PTGER2P43116 358 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 COBLL1Q53SF7 1204 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 CENPPQ6IPU0 288 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 REXO1L1PQ8IX06 675 aa13.36□□□□□ -0.27
USP3-202ENST00000380324 GUF1Q8N442 669 aaKnown RBP13.36□□□□□ -0.27
USP3-202ENST00000380324 EML1O00423 815 aa13.35□□□□□ -0.27
USP3-202ENST00000380324 NFIBO00712 420 aa13.35□□□□□ -0.27
USP3-202ENST00000380324 WDR46O15213 610 aaKnown RBP13.35□□□□□ -0.27
USP3-202ENST00000380324 FLOT1O75955 427 aa13.35□□□□□ -0.27
USP3-202ENST00000380324 ICAM1P05362 532 aa13.35□□□□□ -0.27
USP3-202ENST00000380324 RPA1P27694 616 aa13.35□□□□□ -0.27
USP3-202ENST00000380324 SLC12A3P55017 1021 aa13.35□□□□□ -0.27
USP3-202ENST00000380324 ANGEL2Q5VTE6 544 aaKnown RBP13.35□□□□□ -0.27
USP3-202ENST00000380324 LRCH2Q5VUJ6 765 aa13.35□□□□□ -0.27
USP3-202ENST00000380324 RAD9BQ6WBX8 426 aa13.35□□□□□ -0.27
USP3-202ENST00000380324 NOC4LQ9BVI4 516 aaKnown RBP13.35□□□□□ -0.27
USP3-202ENST00000380324 RGL1Q9NZL6 768 aa13.35□□□□□ -0.27
USP3-202ENST00000380324 DNAI1Q9UI46 699 aa13.35□□□□□ -0.27
USP3-202ENST00000380324 ZNF536O15090 1300 aa13.35□□□□□ -0.27
USP3-202ENST00000380324 CTNND1O60716 968 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms