RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 CYP2W1Q8TAV3 490 aa22.12■■□□□ 1.13
LHX3-202ENST00000371748 CHURC1Q8WUH1 139 aa22.12■■□□□ 1.13
LHX3-202ENST00000371748 RANBP17Q9H2T7 1088 aaKnown RBP22.12■■□□□ 1.13
LHX3-202ENST00000371748 BCS1LQ9Y276 419 aa22.12■■□□□ 1.13
LHX3-202ENST00000371748 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.12■■□□□ 1.13
LHX3-202ENST00000371748 MED24O75448 989 aa22.12■■□□□ 1.13
LHX3-202ENST00000371748 PPP1R2P41236 205 aa22.12■■□□□ 1.13
LHX3-202ENST00000371748 COBLL1Q53SF7 1204 aa22.12■■□□□ 1.13
LHX3-202ENST00000371748 NOC3LQ8WTT2 800 aaKnown RBP22.12■■□□□ 1.13
LHX3-202ENST00000371748 DESI2Q9BSY9 194 aa22.12■■□□□ 1.13
LHX3-202ENST00000371748 LRRC27Q9C0I9 530 aa22.12■■□□□ 1.13
LHX3-202ENST00000371748 RNF225M0QZC1 329 aaPredicted RBP22.11■■□□□ 1.13
LHX3-202ENST00000371748 PIK3CDO00329 1044 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 ZSCAN12O43309 604 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 ASNSP08243 561 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 SPIRE1Q08AE8 756 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 DNAJC19Q96DA6 116 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 SH2D4AQ9H788 454 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 MAP3K10Q02779 954 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 TERF2Q15554 542 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 NCAPH2Q6IBW4 605 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 CNGA4Q8IV77 575 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 GLIS3Q8NEA6 775 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 FBXO41Q8TF61 875 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 CNOT6LQ96LI5 555 aaKnown RBP22.11■■□□□ 1.13
LHX3-202ENST00000371748 ZNF446Q9NWS9 450 aa22.11■■□□□ 1.13
LHX3-202ENST00000371748 LGALS16A8MUM7 142 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 TPM1P09493 284 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 ZNF76P36508 570 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 MB21D1Q8N884 522 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 ASTN2O75129 1339 aaPredicted RBP22.1■■□□□ 1.13
LHX3-202ENST00000371748 POTEFA5A3E0 1075 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 PHF20L1A8MW92 1017 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 MSH4O15457 936 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 PLA2G4BP0C869 781 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 POTEIP0CG38 1075 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 LRRC41Q15345 812 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 CENPPQ6IPU0 288 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 POTEGQ6S5H5 508 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 POTEEQ6S8J3 1075 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 TUBGCP2Q9BSJ2 902 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 ZNF341Q9BYN7 854 aa22.1■■□□□ 1.13
LHX3-202ENST00000371748 TBX3O15119 743 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 CIITAP33076 1130 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 RASSF7Q02833 373 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 EHHADHQ08426 723 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 RAD9BQ6WBX8 426 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 SAMD7Q7Z3H4 446 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 LRRN4CLQ8ND94 238 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 ZNF507Q8TCN5 953 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 TEPSINQ96N21 525 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 B4DLN1 442 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 NKRFO15226 690 aaKnown RBP eCLIP22.09■■□□□ 1.13
LHX3-202ENST00000371748 ZNF280AP59817 542 aaPredicted RBP22.09■■□□□ 1.13
LHX3-202ENST00000371748 COASYQ13057 564 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 ERCC6LQ2NKX8 1250 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 TRIM65Q6PJ69 517 aa22.09■■□□□ 1.13
LHX3-202ENST00000371748 NPHP3-ACAD11A0A0J9YXS1 232 aa22.08■■□□□ 1.13
LHX3-202ENST00000371748 H2AFXP16104 143 aaPredicted RBP22.08■■□□□ 1.13
LHX3-202ENST00000371748 UBXN2AP68543 259 aa22.08■■□□□ 1.13
LHX3-202ENST00000371748 CACNB1Q02641 598 aaPredicted RBP22.08■■□□□ 1.13
LHX3-202ENST00000371748 TRAF1Q13077 416 aa22.08■■□□□ 1.13
LHX3-202ENST00000371748 HAUS3Q68CZ6 603 aa22.08■■□□□ 1.13
LHX3-202ENST00000371748 FAM160B2Q86V87 743 aa22.08■■□□□ 1.13
LHX3-202ENST00000371748 CATSPER3Q86XQ3 398 aa22.08■■□□□ 1.13
LHX3-202ENST00000371748 GUF1Q8N442 669 aaKnown RBP22.08■■□□□ 1.13
LHX3-202ENST00000371748 NAA15Q9BXJ9 866 aaKnown RBP22.08■■□□□ 1.13
LHX3-202ENST00000371748 PANK4Q9NVE7 773 aa22.08■■□□□ 1.13
LHX3-202ENST00000371748 FEM1BQ9UK73 627 aa22.08■■□□□ 1.13
LHX3-202ENST00000371748 GJA3Q9Y6H8 435 aa22.08■■□□□ 1.13
LHX3-202ENST00000371748 GCOM1H8Y6P7 765 aaPredicted RBP22.07■■□□□ 1.12
LHX3-202ENST00000371748 CYP3A4P08684 503 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 POLR2MP0CAP2 368 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 GMPSP49915 693 aaPredicted RBP22.07■■□□□ 1.12
LHX3-202ENST00000371748 ETF1P62495 437 aaKnown RBP22.07■■□□□ 1.12
LHX3-202ENST00000371748 RAD51AP2Q09MP3 1159 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 GPBP1Q86WP2 473 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 MICALL2Q8IY33 904 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 FAM20AQ96MK3 541 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 ABHD10Q9NUJ1 306 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 DNAI1Q9UI46 699 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 PLA2G6O60733 806 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 INPP5BP32019 993 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 MTIF2P46199 727 aaKnown RBP22.07■■□□□ 1.12
LHX3-202ENST00000371748 R3HDM1Q15032 1099 aaKnown RBP22.07■■□□□ 1.12
LHX3-202ENST00000371748 TBC1D10BQ4KMP7 808 aaPredicted RBP22.07■■□□□ 1.12
LHX3-202ENST00000371748 FAM114A1Q8IWE2 563 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 CCDC51Q96ER9 411 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 BMP2KQ9NSY1 1161 aaPredicted RBP22.07■■□□□ 1.12
LHX3-202ENST00000371748 TBC1D7Q9P0N9 293 aa22.07■■□□□ 1.12
LHX3-202ENST00000371748 MEIS1O00470 390 aa22.06■■□□□ 1.12
LHX3-202ENST00000371748 PSMD2Q13200 908 aa22.06■■□□□ 1.12
LHX3-202ENST00000371748 DGKZQ13574 1117 aa22.06■■□□□ 1.12
LHX3-202ENST00000371748 TNFAIP1Q13829 316 aa22.06■■□□□ 1.12
LHX3-202ENST00000371748 TRIM14Q14142 442 aa22.06■■□□□ 1.12
LHX3-202ENST00000371748 SLC30A10Q6XR72 485 aa22.06■■□□□ 1.12
LHX3-202ENST00000371748 LDHDQ86WU2 507 aa22.06■■□□□ 1.12
LHX3-202ENST00000371748 IGLV3-22A0A075B6J6 115 aa22.06■■□□□ 1.12
LHX3-202ENST00000371748 RPS12P25398 132 aaKnown RBP22.06■■□□□ 1.12
LHX3-202ENST00000371748 KRT9P35527 623 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms