RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ELOA2Q8IYF1 753 aaPredicted RBP15.45■□□□□ 0.06
TRIM4-201ENST00000349062 PSMB7Q99436 277 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 DUSP9Q99956 384 aaKnown RBP15.45■□□□□ 0.06
TRIM4-201ENST00000349062 IKZF4Q9H2S9 585 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 RGS17Q9UGC6 210 aaPredicted RBP15.45■□□□□ 0.06
TRIM4-201ENST00000349062 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.45■□□□□ 0.061e-6■■■■□ 23.3
TRIM4-201ENST00000349062 SPDYE2BA6NHP3 402 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 RHOBTB3O94955 611 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 SPDYE6P0CI01 402 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 TCERG1LQ5VWI1 586 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 MB21D1Q8N884 522 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 RAD54LQ92698 747 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 ABHD10Q9NUJ1 306 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 SCN9AQ15858 1988 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 MACROD2A1Z1Q3 448 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 FAM86B1E9PN63 330 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 KIF5CO60282 957 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 MED24O75448 989 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 FAM86B2P0C5J1 330 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 BAG6P46379 1132 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 STAT2P52630 851 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 NAP1L1P55209 391 aaKnown RBP15.45■□□□□ 0.06
TRIM4-201ENST00000349062 ARHGEF10LQ9HCE6 1279 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 MYO1BO43795 1136 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 PLA2G4BP0C869 781 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 CCNE1P24864 410 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 TTI2Q6NXR4 508 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 TRIM65Q6PJ69 517 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 KSR1Q8IVT5 923 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 CAPZA3Q96KX2 299 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 CAMKK2Q96RR4 588 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 ZNF341Q9BYN7 854 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 SAMM50Q9Y512 469 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 MEIS2O14770 477 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 CCP110O43303 1012 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 CXCL9Q07325 125 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 PTPROQ16827 1216 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 FKBP15Q5T1M5 1219 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 KRT26Q7Z3Y9 468 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 DEF6Q9H4E7 631 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 CTDP1Q9Y5B0 961 aaPredicted RBP15.44■□□□□ 0.06
TRIM4-201ENST00000349062 ADGRG1Q9Y653 693 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 ANKRD31Q8N7Z5 1873 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 PLEKP08567 350 aaPredicted RBP15.44■□□□□ 0.06
TRIM4-201ENST00000349062 PNMA6AP0CW24 399 aaPredicted RBP15.44■□□□□ 0.06
TRIM4-201ENST00000349062 EPS15P42566 896 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 SLC35F6Q8N357 371 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 IDI2Q9BXS1 227 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 BHMT2Q9H2M3 363 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 NYAP2Q9P242 653 aa15.44■□□□□ 0.06
TRIM4-201ENST00000349062 RSPH10B2B2RC85 870 aa15.43■□□□□ 0.06
TRIM4-201ENST00000349062 RSPH10BP0C881 870 aa15.43■□□□□ 0.06
TRIM4-201ENST00000349062 AGBL1Q96MI9 1066 aa15.43■□□□□ 0.06
TRIM4-201ENST00000349062 LIMA1Q9UHB6 759 aaKnown RBP15.43■□□□□ 0.06
TRIM4-201ENST00000349062 KIF2AO00139 706 aaPredicted RBP15.43■□□□□ 0.06
TRIM4-201ENST00000349062 ALAS1P13196 640 aa15.43■□□□□ 0.06
TRIM4-201ENST00000349062 TDRD12Q587J7 1177 aaKnown RBP15.43■□□□□ 0.06
TRIM4-201ENST00000349062 FAM26FQ5R3K3 315 aa15.43■□□□□ 0.06
TRIM4-201ENST00000349062 C7orf43Q8WVR3 580 aa15.43■□□□□ 0.06
TRIM4-201ENST00000349062 ZNHIT6Q9NWK9 470 aaKnown RBP15.43■□□□□ 0.06
TRIM4-201ENST00000349062 ESYT2A0FGR8 921 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 CLIC2O15247 247 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 PDE4CQ08493 712 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 COASYQ13057 564 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 CACNA2D4Q7Z3S7 1137 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 SUPT20HQ8NEM7 779 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 BICDL2A1A5D9 508 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 PRPF6O94906 941 aaKnown RBP15.42■□□□□ 0.06
TRIM4-201ENST00000349062 IPO7O95373 1038 aaKnown RBP15.42■□□□□ 0.06
TRIM4-201ENST00000349062 RASA3Q14644 834 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 DLK2Q6UY11 383 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 DCAF4Q8WV16 495 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 PURBQ96QR8 312 aaKnown RBP15.42■□□□□ 0.06
TRIM4-201ENST00000349062 ZNF831Q5JPB2 1677 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 DCAF17Q5H9S7 520 aaPredicted RBP15.42■□□□□ 0.06
TRIM4-201ENST00000349062 RRAGAQ7L523 313 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 RDH13Q8NBN7 331 aa15.42■□□□□ 0.06
TRIM4-201ENST00000349062 LGALS16A8MUM7 142 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 RHOXF2BP0C7M4 288 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 MYOCDQ8IZQ8 938 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 OR8K1Q8NGG5 319 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 C7orf25Q9BPX7 421 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 RHOXF2Q9BQY4 288 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 HDAC6Q9UBN7 1215 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 DUSP10Q9Y6W6 482 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 MYH8P13535 1937 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 ABCB11O95342 1321 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 EPHB6O15197 1021 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 MRPS25P82663 173 aaKnown RBP15.41■□□□□ 0.06
TRIM4-201ENST00000349062 KCNB1Q14721 858 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 CATSPER3Q86XQ3 398 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 DHTKD1Q96HY7 919 aaPredicted RBP15.41■□□□□ 0.06
TRIM4-201ENST00000349062 TSG101Q99816 390 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 EHD4Q9H223 541 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 MAST2Q6P0Q8 1798 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 MYCLP12524 364 aaPredicted RBP15.41■□□□□ 0.06
TRIM4-201ENST00000349062 RASSF7Q02833 373 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 PPP2R3AQ06190 1150 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 CCDC122Q5T0U0 273 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 CYP26C1Q6V0L0 522 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms