RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 CCP110O43303 1012 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 GYPCP04921 128 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 PLA2G4BP0C869 781 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 CASP14P31944 242 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 UBXN1Q04323 297 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 CENPPQ6IPU0 288 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 CATSPER3Q86XQ3 398 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 NLGN2Q8NFZ4 835 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 ERMNQ8TAM6 284 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 BMP2KQ9NSY1 1161 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.74■□□□□ 0.114e-8■■■□□ 18.8
CDK5RAP1-202ENST00000346416 ZNF541Q9H0D2 1346 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 POTEFA5A3E0 1075 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 WDR46O15213 610 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 MFAP3LO75121 409 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 POTEIP0CG38 1075 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 GTF2F1P35269 517 aaKnown RBP eCLIP15.74■□□□□ 0.112e-7■□□□□ 10.9
CDK5RAP1-202ENST00000346416 PSMD2Q13200 908 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 NBPF12Q5TAG4 269 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 POTEGQ6S5H5 508 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 POTEEQ6S8J3 1075 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 GUF1Q8N442 669 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 LPAR1Q92633 364 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 KIAA1683Q9H0B3 1180 aa15.74■□□□□ 0.11
CDK5RAP1-202ENST00000346416 LGALS16A8MUM7 142 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 KIF2AO00139 706 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 RPA1P27694 616 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 FXR1P51114 621 aaKnown RBP eCLIP15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 DGKZQ13574 1117 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 PRPF38AQ8NAV1 312 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 AGBL1Q96MI9 1066 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 GINM1Q9NU53 330 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 VAV3Q9UKW4 847 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 PES1O00541 588 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 DYNC1I1O14576 645 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 ICAM1P05362 532 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 TPM1P09493 284 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 SPATA31C1P0DKV0 1188 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 UBXN2AP68543 259 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 COASYQ13057 564 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 GPBP1Q86WP2 473 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 CNGA4Q8IV77 575 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 GLIS3Q8NEA6 775 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 SLF1Q9BQI6 1058 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 TUBGCP2Q9BSJ2 902 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 WDR18Q9BV38 432 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 PANK4Q9NVE7 773 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 CCPG1Q9ULG6 757 aa15.73■□□□□ 0.11
CDK5RAP1-202ENST00000346416 ZNF536O15090 1300 aa15.72■□□□□ 0.11
CDK5RAP1-202ENST00000346416 RRP9O43818 475 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP1-202ENST00000346416 PRKCSHP14314 528 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP1-202ENST00000346416 CYP11B2P19099 503 aa15.72■□□□□ 0.11
CDK5RAP1-202ENST00000346416 HOXA7P31268 230 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP1-202ENST00000346416 LRRC41Q15345 812 aa15.72■□□□□ 0.11
CDK5RAP1-202ENST00000346416 FAM114A1Q8IWE2 563 aa15.72■□□□□ 0.11
CDK5RAP1-202ENST00000346416 MB21D1Q8N884 522 aa15.72■□□□□ 0.11
CDK5RAP1-202ENST00000346416 ZNF507Q8TCN5 953 aa15.72■□□□□ 0.11
CDK5RAP1-202ENST00000346416 CNOT6LQ96LI5 555 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP1-202ENST00000346416 PPP2R2CQ9Y2T4 447 aa15.72■□□□□ 0.11
CDK5RAP1-202ENST00000346416 MEIS1O00470 390 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 ZSCAN12O43309 604 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 SLC12A3P55017 1021 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 PSMC6P62333 389 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 TRIM14Q14142 442 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 TOGARAM2Q6ZUX3 1019 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 REXO1L1PQ8IX06 675 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 KIF18AQ8NI77 898 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 NAA15Q9BXJ9 866 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 EHMT1Q9H9B1 1298 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 DNM3Q9UQ16 869 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 STK24Q9Y6E0 443 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 NPHP3-ACAD11A0A0J9YXS1 232 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 B4DLN1 442 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 CACNB1Q02641 598 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 MTMR2Q13614 643 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 CEP55Q53EZ4 464 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 ARSHQ5FYA8 562 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 FAM26FQ5R3K3 315 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 CCDC65Q8IXS2 484 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 HOOK2Q96ED9 719 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 CCDC51Q96ER9 411 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 TANGO6Q9C0B7 1094 aa15.71■□□□□ 0.11
CDK5RAP1-202ENST00000346416 A0A1W2PQC6 194 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 SOWAHDA6NJG2 315 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 RNF225M0QZC1 329 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 EML1O00423 815 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 MTIF2P46199 727 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 DNM2P50570 870 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 CYP4A11Q02928 519 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 LRRC63Q05C16 580 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 RAD51AP2Q09MP3 1159 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 PABPC4Q13310 644 aaKnown RBP eCLIP15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 MTF1Q14872 753 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 ANGEL2Q5VTE6 544 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 DCAF15Q66K64 600 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 SLC30A10Q6XR72 485 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 MYOCDQ8IZQ8 938 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 FLOT1O75955 427 aa15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 KRT18P05783 430 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP1-202ENST00000346416 VCAM1P19320 739 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms