RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 LRRN4CLQ8ND94 238 aa12.06□□□□□ -0.48
RTN3-201ENST00000338850 CCDC47Q96A33 483 aaKnown RBP12.06□□□□□ -0.48
RTN3-201ENST00000338850 RPGRIP1Q96KN7 1286 aa12.06□□□□□ -0.48
RTN3-201ENST00000338850 DNAJC7Q99615 494 aa12.06□□□□□ -0.48
RTN3-201ENST00000338850 ARID3AQ99856 593 aa12.06□□□□□ -0.48
RTN3-201ENST00000338850 ARFGAP3Q9NP61 516 aa12.06□□□□□ -0.48
RTN3-201ENST00000338850 PICK1Q9NRD5 415 aa12.06□□□□□ -0.48
RTN3-201ENST00000338850 PSD3Q9NYI0 1048 aa12.06□□□□□ -0.48
RTN3-201ENST00000338850 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.06□□□□□ -0.48
RTN3-201ENST00000338850 CTNND2Q9UQB3 1225 aa12.06□□□□□ -0.48
RTN3-201ENST00000338850 AFG3L2Q9Y4W6 797 aa12.06□□□□□ -0.48
RTN3-201ENST00000338850 ZHX2Q9Y6X8 837 aa12.06□□□□□ -0.48
RTN3-201ENST00000338850 ZSWIM8A7E2V4 1837 aa12.06□□□□□ -0.48
RTN3-201ENST00000338850 A0A0G2JLL6 359 aaPredicted RBP12.05□□□□□ -0.48
RTN3-201ENST00000338850 BICDL2A1A5D9 508 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 CTAGE9A4FU28 777 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 PALM3A6NDB9 673 aaPredicted RBP12.05□□□□□ -0.48
RTN3-201ENST00000338850 KCNJ18B7U540 433 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 WNT7AO00755 349 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 CTNND1O60716 968 aaKnown RBP12.05□□□□□ -0.48
RTN3-201ENST00000338850 PRDM1O75626 825 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 BAG3O95817 575 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 GNRH1P01148 92 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 PLCG2P16885 1265 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 CTGFP29279 349 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 STAT6P42226 847 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 PLA2G4AP47712 749 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 KCNJ12Q14500 433 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 MEA1Q16626 185 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 TEX35Q5T0J7 233 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 RRAGBQ5VZM2 374 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 CNNM4Q6P4Q7 775 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 DTHD1Q6ZMT9 781 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 PIK3AP1Q6ZUJ8 805 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 PRRT2Q7Z6L0 340 aaPredicted RBP12.05□□□□□ -0.48
RTN3-201ENST00000338850 CCDC82Q8N4S0 544 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 GIMAP8Q8ND71 665 aaPredicted RBP12.05□□□□□ -0.48
RTN3-201ENST00000338850 PNMA1Q8ND90 353 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 NELFBQ8WX92 580 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 RUBCNQ92622 972 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 TRIM47Q96LD4 638 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 PARK7Q99497 189 aaKnown RBP12.05□□□□□ -0.48
RTN3-201ENST00000338850 MTRQ99707 1265 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 ZMYND12Q9H0C1 365 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 HAUS4Q9H6D7 363 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 BARHL2Q9NY43 387 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
RTN3-201ENST00000338850 COL2A1P02458 1487 aaPredicted RBP12.05□□□□□ -0.48
RTN3-201ENST00000338850 RBBP6Q7Z6E9 1792 aaKnown RBP12.05□□□□□ -0.48
RTN3-201ENST00000338850 CYP2D7A0A087X1C5 515 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 CCDC194A0A1B0GVG4 234 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 A0A1W2PQJ5 194 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 SOWAHDA6NJG2 315 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 FAM196BA6NMK8 535 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 MAP2K7O14733 419 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 PSMA7O14818 248 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 N4BP3O15049 544 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 KLRC4O43908 158 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 TBC1D12O60347 775 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 ERLIN1O75477 346 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 CYP2C8P10632 490 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 BCRP11274 1271 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 EN2P19622 333 aaPredicted RBP12.04□□□□□ -0.48
RTN3-201ENST00000338850 CASP14P31944 242 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 PSMC4P43686 418 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 DNM2P50570 870 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 PRMT2P55345 433 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 CHMP4BP1P59074 171 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 IL17AQ16552 155 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 NAALADL2Q58DX5 795 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 FASTKD5Q7L8L6 764 aaKnown RBP12.04□□□□□ -0.48
RTN3-201ENST00000338850 ZNF507Q8TCN5 953 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 NAPGQ99747 312 aaPredicted RBP12.04□□□□□ -0.48
RTN3-201ENST00000338850 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.04□□□□□ -0.48
RTN3-201ENST00000338850 MAD2L2Q9UI95 211 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 CAPN11Q9UMQ6 739 aa12.04□□□□□ -0.48
RTN3-201ENST00000338850 ANO9A1A5B4 782 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 STXBP3O00186 592 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 ECM2O94769 699 aaPredicted RBP12.03□□□□□ -0.48
RTN3-201ENST00000338850 ATP2B1P20020 1258 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 OSBPP22059 807 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 MCM3P25205 808 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 GNA11P29992 359 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 CYP2C19P33261 490 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 ARHGAP25P42331 645 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 FXR1P51114 621 aaKnown RBP eCLIP12.03□□□□□ -0.48
RTN3-201ENST00000338850 AMPD2Q01433 879 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 GOLGA8FQ08AF8 430 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 GOLGA8DPQ0D2H9 430 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 PPP1R18Q6NYC8 613 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 GADL1Q6ZQY3 521 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 CCDC84Q86UT8 332 aaPredicted RBP12.03□□□□□ -0.48
RTN3-201ENST00000338850 TEX11Q8IYF3 940 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 CCDC170Q8IYT3 715 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 OR8K1Q8NGG5 319 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 SH3RF3Q8TEJ3 882 aaPredicted RBP12.03□□□□□ -0.48
RTN3-201ENST00000338850 SH3TC2Q8TF17 1288 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 C7orf25Q9BPX7 421 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
RTN3-201ENST00000338850 TTYH3Q9C0H2 523 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms