RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ADGRG1Q9Y653 693 aa24.41■■□□□ 1.5
TPM4-201ENST00000300933 ARHGAP4P98171 946 aa24.41■■□□□ 1.5
TPM4-201ENST00000300933 FAM83BQ5T0W9 1011 aa24.41■■□□□ 1.5
TPM4-201ENST00000300933 CCDC174Q6PII3 467 aa24.41■■□□□ 1.5
TPM4-201ENST00000300933 IPO4Q8TEX9 1081 aaKnown RBP24.41■■□□□ 1.5
TPM4-201ENST00000300933 FGFBP2Q9BYJ0 223 aa24.41■■□□□ 1.5
TPM4-201ENST00000300933 MAGEF1Q9HAY2 307 aa24.41■■□□□ 1.5
TPM4-201ENST00000300933 PRR12Q9ULL5 1215 aa24.41■■□□□ 1.5
TPM4-201ENST00000300933 MEIS1O00470 390 aa24.4■■□□□ 1.5
TPM4-201ENST00000300933 OPLAHO14841 1288 aa24.4■■□□□ 1.5
TPM4-201ENST00000300933 UBXN2AP68543 259 aa24.4■■□□□ 1.5
TPM4-201ENST00000300933 MTIF2P46199 727 aaKnown RBP24.4■■□□□ 1.5
TPM4-201ENST00000300933 ORC2Q13416 577 aaPredicted RBP24.4■■□□□ 1.5
TPM4-201ENST00000300933 CNNM4Q6P4Q7 775 aa24.4■■□□□ 1.5
TPM4-201ENST00000300933 CNGA4Q8IV77 575 aa24.4■■□□□ 1.5
TPM4-201ENST00000300933 GPR161Q8N6U8 529 aaKnown RBP24.4■■□□□ 1.5
TPM4-201ENST00000300933 LCMT1Q9UIC8 334 aa24.4■■□□□ 1.5
TPM4-201ENST00000300933 TFR2Q9UP52 801 aa24.4■■□□□ 1.5
TPM4-201ENST00000300933 ZNF646O15015 1829 aaPredicted RBP24.4■■□□□ 1.5
TPM4-201ENST00000300933 FAM86B1E9PN63 330 aa24.39■■□□□ 1.5
TPM4-201ENST00000300933 FAM86B2P0C5J1 330 aa24.39■■□□□ 1.5
TPM4-201ENST00000300933 LMAN1P49257 510 aa24.39■■□□□ 1.5
TPM4-201ENST00000300933 NBPF9Q3BBW0 867 aa24.39■■□□□ 1.5
TPM4-201ENST00000300933 THAP9Q9H5L6 903 aa24.39■■□□□ 1.5
TPM4-201ENST00000300933 LGALS16A8MUM7 142 aa24.39■■□□□ 1.49
TPM4-201ENST00000300933 CCDC175P0C221 793 aa24.39■■□□□ 1.49
TPM4-201ENST00000300933 MAP3K9P80192 1104 aa24.39■■□□□ 1.49
TPM4-201ENST00000300933 C10orf67Q8IYJ2 551 aa24.39■■□□□ 1.49
TPM4-201ENST00000300933 GMCL1P1Q8NEA9 526 aa24.39■■□□□ 1.49
TPM4-201ENST00000300933 KIFC2Q96AC6 838 aa24.39■■□□□ 1.49
TPM4-201ENST00000300933 ZHX3Q9H4I2 956 aa24.39■■□□□ 1.49
TPM4-201ENST00000300933 AGPAT5Q9NUQ2 364 aa24.39■■□□□ 1.49
TPM4-201ENST00000300933 STK17AQ9UEE5 414 aa24.39■■□□□ 1.49
TPM4-201ENST00000300933 ATRNL1Q5VV63 1379 aa24.39■■□□□ 1.49
TPM4-201ENST00000300933 POTEFA5A3E0 1075 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 TRIM66O15016 1216 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 ZBTB7AO95365 584 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 VIL1P09327 827 aaKnown RBP24.38■■□□□ 1.49
TPM4-201ENST00000300933 POTEIP0CG38 1075 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 POTEGQ6S5H5 508 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 POTEEQ6S8J3 1075 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 ZNF507Q8TCN5 953 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 GMCL1Q96IK5 515 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 PCMTD1Q96MG8 357 aaPredicted RBP24.38■■□□□ 1.49
TPM4-201ENST00000300933 GMLQ99445 158 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 SLF1Q9BQI6 1058 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 ATP8B1O43520 1251 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 NPM3O75607 178 aaKnown RBP24.38■■□□□ 1.49
TPM4-201ENST00000300933 TMEM119Q4V9L6 283 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 UNC13DQ70J99 1090 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 TSPYL1Q9H0U9 437 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 FBXO28Q9NVF7 368 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 ITIH6Q6UXX5 1313 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 MED24O75448 989 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 EEF1GP26641 437 aaKnown RBP24.38■■□□□ 1.49
TPM4-201ENST00000300933 PSMC6P62333 389 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 TBC1D8BQ0IIM8 1120 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 FUT8Q9BYC5 575 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 MRFAP1Q9Y605 127 aa24.38■■□□□ 1.49
TPM4-201ENST00000300933 SPDYE3A6NKU9 549 aa24.37■■□□□ 1.49
TPM4-201ENST00000300933 CFBP00751 764 aa24.37■■□□□ 1.49
TPM4-201ENST00000300933 NCAPH2Q6IBW4 605 aa24.37■■□□□ 1.49
TPM4-201ENST00000300933 RTKN2Q8IZC4 609 aa24.37■■□□□ 1.49
TPM4-201ENST00000300933 NOC4LQ9BVI4 516 aaKnown RBP24.37■■□□□ 1.49
TPM4-201ENST00000300933 ADAM21Q9UKJ8 722 aa24.37■■□□□ 1.49
TPM4-201ENST00000300933 CNTNAP1P78357 1384 aa24.37■■□□□ 1.49
TPM4-201ENST00000300933 TNNT3P45378 269 aaPredicted RBP24.37■■□□□ 1.49
TPM4-201ENST00000300933 H3BQF6 201 aa24.36■■□□□ 1.49
TPM4-201ENST00000300933 EGFRP00533 1210 aa24.36■■□□□ 1.49
TPM4-201ENST00000300933 CYP4A11Q02928 519 aa24.36■■□□□ 1.49
TPM4-201ENST00000300933 MUM1L1Q5H9M0 696 aa24.36■■□□□ 1.49
TPM4-201ENST00000300933 RASSF10A6NK89 507 aa24.36■■□□□ 1.49
TPM4-201ENST00000300933 GCFC2P16383 781 aaKnown RBP24.36■■□□□ 1.49
TPM4-201ENST00000300933 NELFCDQ8IXH7 590 aa24.36■■□□□ 1.49
TPM4-201ENST00000300933 DNAJC19Q96DA6 116 aa24.36■■□□□ 1.49
TPM4-201ENST00000300933 KCNMB3Q9NPA1 279 aa24.36■■□□□ 1.49
TPM4-201ENST00000300933 HDAC9Q9UKV0 1011 aa24.36■■□□□ 1.49
TPM4-201ENST00000300933 ARFGEF1Q9Y6D6 1849 aa24.36■■□□□ 1.49
TPM4-201ENST00000300933 BICDL2A1A5D9 508 aa24.35■■□□□ 1.49
TPM4-201ENST00000300933 STAT2P52630 851 aa24.35■■□□□ 1.49
TPM4-201ENST00000300933 CXCL9Q07325 125 aa24.35■■□□□ 1.49
TPM4-201ENST00000300933 DGKZQ13574 1117 aa24.35■■□□□ 1.49
TPM4-201ENST00000300933 MIIPQ5JXC2 388 aa24.35■■□□□ 1.49
TPM4-201ENST00000300933 RSRC2Q7L4I2 434 aaKnown RBP24.35■■□□□ 1.49
TPM4-201ENST00000300933 FAM151AQ8WW52 585 aa24.35■■□□□ 1.49
TPM4-201ENST00000300933 BCAS3Q9H6U6 928 aa24.35■■□□□ 1.49
TPM4-201ENST00000300933 ZBTB21Q9ULJ3 1066 aa24.35■■□□□ 1.49
TPM4-201ENST00000300933 TFRCP02786 760 aaKnown RBP24.35■■□□□ 1.49
TPM4-201ENST00000300933 USP11P51784 963 aa24.35■■□□□ 1.49
TPM4-201ENST00000300933 C10orf71Q711Q0 1435 aa24.34■■□□□ 1.49
TPM4-201ENST00000300933 PLA2G4BP0C869 781 aa24.34■■□□□ 1.49
TPM4-201ENST00000300933 TRIM21P19474 475 aaKnown RBP24.34■■□□□ 1.49
TPM4-201ENST00000300933 COASYQ13057 564 aa24.34■■□□□ 1.49
TPM4-201ENST00000300933 LONRF2Q1L5Z9 754 aa24.34■■□□□ 1.49
TPM4-201ENST00000300933 CENPPQ6IPU0 288 aa24.34■■□□□ 1.49
TPM4-201ENST00000300933 CCDC155Q8N6L0 562 aa24.34■■□□□ 1.49
TPM4-201ENST00000300933 PANK4Q9NVE7 773 aa24.34■■□□□ 1.49
TPM4-201ENST00000300933 TRIM10Q9UDY6 481 aa24.34■■□□□ 1.49
TPM4-201ENST00000300933 LUC7L2Q9Y383 392 aaKnown RBP24.34■■□□□ 1.49
TPM4-201ENST00000300933 LENG9Q96B70 501 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms