RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 FBXO11Q86XK2 927 aa17.53■□□□□ 0.4
LRFN1-201ENST00000248668 CAPN11Q9UMQ6 739 aa17.53■□□□□ 0.4
LRFN1-201ENST00000248668 PLEKP08567 350 aaPredicted RBP17.52■□□□□ 0.4
LRFN1-201ENST00000248668 RXRBP28702 533 aa17.52■□□□□ 0.4
LRFN1-201ENST00000248668 CENPPQ6IPU0 288 aa17.52■□□□□ 0.4
LRFN1-201ENST00000248668 GPBP1Q86WP2 473 aa17.52■□□□□ 0.4
LRFN1-201ENST00000248668 NOC3LQ8WTT2 800 aaKnown RBP17.52■□□□□ 0.4
LRFN1-201ENST00000248668 AMNQ9BXJ7 453 aa17.52■□□□□ 0.4
LRFN1-201ENST00000248668 PANK4Q9NVE7 773 aa17.52■□□□□ 0.4
LRFN1-201ENST00000248668 EFCAB8A8MWE9 144 aa17.52■□□□□ 0.39
LRFN1-201ENST00000248668 MED24O75448 989 aa17.52■□□□□ 0.39
LRFN1-201ENST00000248668 FKBP15Q5T1M5 1219 aa17.52■□□□□ 0.39
LRFN1-201ENST00000248668 SYDE2Q5VT97 1194 aa17.52■□□□□ 0.39
LRFN1-201ENST00000248668 CCDC174Q6PII3 467 aa17.52■□□□□ 0.39
LRFN1-201ENST00000248668 FAM114A1Q8IWE2 563 aa17.52■□□□□ 0.39
LRFN1-201ENST00000248668 MKL1Q969V6 931 aa17.52■□□□□ 0.39
LRFN1-201ENST00000248668 A0A1W2PQC6 194 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 CCDC66A2RUB6 948 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 BMP3P12645 472 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 H2AFXP16104 143 aaPredicted RBP17.51■□□□□ 0.39
LRFN1-201ENST00000248668 KIAA1755Q5JYT7 1200 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 TBC1D5Q92609 795 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 CTAGE9A4FU28 777 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 SPDYE3A6NKU9 549 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 PLA2G4BP0C869 781 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 PSMC6P62333 389 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 SLC15A2Q16348 729 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 HERC4Q5GLZ8 1057 aaPredicted RBP17.51■□□□□ 0.39
LRFN1-201ENST00000248668 SMCR8Q8TEV9 937 aaPredicted RBP17.51■□□□□ 0.39
LRFN1-201ENST00000248668 C7orf43Q8WVR3 580 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 DNAJC19Q96DA6 116 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 FAM86B1E9PN63 330 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 TRAF5O00463 557 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 FAM86B2P0C5J1 330 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 FECHP22830 423 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 PABPC4Q13310 644 aaKnown RBP eCLIP17.51■□□□□ 0.39
LRFN1-201ENST00000248668 FAM26FQ5R3K3 315 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 CC2D2BQ6DHV5 1058 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 KRT26Q7Z3Y9 468 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 KIAA1328Q86T90 577 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 DNAJC7Q99615 494 aa17.51■□□□□ 0.39
LRFN1-201ENST00000248668 PVALEFA0A1B0GWK0 134 aa17.5■□□□□ 0.39
LRFN1-201ENST00000248668 NDST4Q9H3R1 872 aa17.5■□□□□ 0.39
LRFN1-201ENST00000248668 BCAS3Q9H6U6 928 aa17.5■□□□□ 0.39
LRFN1-201ENST00000248668 HDAC6Q9UBN7 1215 aa17.5■□□□□ 0.39
LRFN1-201ENST00000248668 DUSP10Q9Y6W6 482 aa17.5■□□□□ 0.39
LRFN1-201ENST00000248668 QSER1Q2KHR3 1735 aa17.5■□□□□ 0.39
LRFN1-201ENST00000248668 CFBP00751 764 aa17.5■□□□□ 0.39
LRFN1-201ENST00000248668 GCFC2P16383 781 aaKnown RBP17.5■□□□□ 0.39
LRFN1-201ENST00000248668 HERVK_113P62684 666 aa17.5■□□□□ 0.39
LRFN1-201ENST00000248668 CCDC122Q5T0U0 273 aa17.5■□□□□ 0.39
LRFN1-201ENST00000248668 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
LRFN1-201ENST00000248668 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
LRFN1-201ENST00000248668 ZNHIT6Q9NWK9 470 aaKnown RBP17.5■□□□□ 0.39
LRFN1-201ENST00000248668 PSMD14O00487 310 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 ZNF76P36508 570 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 MYOCDQ8IZQ8 938 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 GUF1Q8N442 669 aaKnown RBP17.49■□□□□ 0.39
LRFN1-201ENST00000248668 CRACR2AQ9BSW2 395 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 BMP2KQ9NSY1 1161 aaPredicted RBP17.49■□□□□ 0.39
LRFN1-201ENST00000248668 SIPA1L1O43166 1804 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 RCCD1A6NED2 376 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 HDLBPQ00341 1268 aaKnown RBP17.49■□□□□ 0.39
LRFN1-201ENST00000248668 APBA1Q02410 837 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 VWA3BQ502W6 1294 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 FAM83BQ5T0W9 1011 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 TTYH3Q9C0H2 523 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 NHEJ1Q9H9Q4 299 aaPredicted RBP17.49■□□□□ 0.39
LRFN1-201ENST00000248668 TMOD2Q9NZR1 351 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 CHMP2AO43633 222 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 CHMP4BP1P59074 171 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 LACRTQ9GZZ8 138 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 PRR12Q9ULL5 1215 aa17.49■□□□□ 0.39
LRFN1-201ENST00000248668 MACROD2A1Z1Q3 448 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 CCDC40Q4G0X9 1142 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 NAPGQ99747 312 aaPredicted RBP17.48■□□□□ 0.39
LRFN1-201ENST00000248668 TMEM39BQ9GZU3 492 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 KCNMB3Q9NPA1 279 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 TMCO3Q6UWJ1 677 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 CATSPER3Q86XQ3 398 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 KRT222Q8N1A0 295 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 STK32BQ9NY57 414 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 CDC23Q9UJX2 597 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 OPLAHO14841 1288 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 HMGB2P26583 209 aaKnown RBP17.48■□□□□ 0.39
LRFN1-201ENST00000248668 ENOX2Q16206 610 aaKnown RBP17.48■□□□□ 0.39
LRFN1-201ENST00000248668 LRRC55Q6ZSA7 311 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 TSG101Q99816 390 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 MRIQ9BWK5 157 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 NLRC4Q9NPP4 1024 aa17.48■□□□□ 0.39
LRFN1-201ENST00000248668 SRGAP2O75044 1071 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 RHOXF2BP0C7M4 288 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 ZBED6P86452 979 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 DLGAP5Q15398 846 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 RRAGAQ7L523 313 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 GOLGA1Q92805 767 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 RHOXF2Q9BQY4 288 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 PARD6BQ9BYG5 372 aa17.47■□□□□ 0.39
LRFN1-201ENST00000248668 GLIS2Q9BZE0 524 aaPredicted RBP17.47■□□□□ 0.39
LRFN1-201ENST00000248668 ARGLU1Q9NWB6 273 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms