RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TANGO6Q9C0B7 1094 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 MKNK2Q9HBH9 465 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 STX8Q9UNK0 236 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 GRID2IPA4D2P6 1211 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 NOL4O94818 638 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 TSPY3P0CV98 308 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 TSPY8P0CW00 308 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 SEC24CP53992 1094 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 C1orf131Q8NDD1 294 aaKnown RBP17.11■□□□□ 0.33
DDX55-201ENST00000238146 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 STK17AQ9UEE5 414 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 PACSIN2Q9UNF0 486 aaPredicted RBP17.11■□□□□ 0.33
DDX55-201ENST00000238146 JAG2Q9Y219 1238 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 LAMB2P55268 1798 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 SERPING1P05155 500 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 HIBADHP31937 336 aaKnown RBP17.1■□□□□ 0.33
DDX55-201ENST00000238146 MDH1P40925 334 aaKnown RBP17.1■□□□□ 0.33
DDX55-201ENST00000238146 LRRC41Q15345 812 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 MEI1Q5TIA1 1274 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 CCDC91Q7Z6B0 441 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 YTHDF3Q7Z739 585 aaKnown RBP17.1■□□□□ 0.33
DDX55-201ENST00000238146 CCT8L2Q96SF2 557 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 C6orf50Q9HD87 102 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 CEP72Q9P209 647 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 PCDHGC5Q9Y5F6 944 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 H0YHG0 523 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 RNASE9P60153 205 aaKnown RBP17.1■□□□□ 0.33
DDX55-201ENST00000238146 ITGB3BPQ13352 177 aaPredicted RBP17.1■□□□□ 0.33
DDX55-201ENST00000238146 SFMBT2Q5VUG0 894 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 ARHGAP27Q6ZUM4 889 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 MICALCLQ6ZW33 695 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 MYCBPAPQ8TBZ2 947 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 CABS1Q96KC9 395 aa17.1■□□□□ 0.33
DDX55-201ENST00000238146 RAD51CO43502 376 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 GNA11P29992 359 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 GSCP56915 257 aaPredicted RBP17.09■□□□□ 0.33
DDX55-201ENST00000238146 EHHADHQ08426 723 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 NLRP14Q86W24 1093 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 SLC44A5Q8NCS7 719 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 SYN2Q92777 582 aaPredicted RBP17.09■□□□□ 0.33
DDX55-201ENST00000238146 MTMR9Q96QG7 549 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 LZTS2Q9BRK4 669 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 SPZ1Q9BXG8 430 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 SLAIN2Q9P270 581 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 LOC102724159A0A0B4J2E5 919 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 HMGB1P1B2RPK0 211 aaPredicted RBP17.09■□□□□ 0.33
DDX55-201ENST00000238146 PWP2Q15269 919 aaKnown RBP17.09■□□□□ 0.33
DDX55-201ENST00000238146 TBC1D5Q92609 795 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 NUCKS1Q9H1E3 243 aaKnown RBP17.09■□□□□ 0.33
DDX55-201ENST00000238146 PLAAQ9Y263 795 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 ATP6V0A2Q9Y487 856 aa17.09■□□□□ 0.33
DDX55-201ENST00000238146 HSPA9P38646 679 aaKnown RBP17.08■□□□□ 0.33
DDX55-201ENST00000238146 NT5C2P49902 561 aa17.08■□□□□ 0.33
DDX55-201ENST00000238146 HDLBPQ00341 1268 aaKnown RBP17.08■□□□□ 0.33
DDX55-201ENST00000238146 ITPK1Q13572 414 aa17.08■□□□□ 0.33
DDX55-201ENST00000238146 CEP85LQ5SZL2 805 aa17.08■□□□□ 0.33
DDX55-201ENST00000238146 RIC8AQ9NPQ8 531 aa17.08■□□□□ 0.33
DDX55-201ENST00000238146 LUC7LQ9NQ29 371 aaKnown RBP17.08■□□□□ 0.33
DDX55-201ENST00000238146 BIN2Q9UBW5 565 aaPredicted RBP17.08■□□□□ 0.33
DDX55-201ENST00000238146 MYBP10242 640 aa17.08■□□□□ 0.32
DDX55-201ENST00000238146 POLR2FP61218 127 aaKnown RBP17.08■□□□□ 0.32
DDX55-201ENST00000238146 SLC18A3Q16572 532 aa17.08■□□□□ 0.32
DDX55-201ENST00000238146 MAATS1Q7Z4T9 603 aa17.08■□□□□ 0.32
DDX55-201ENST00000238146 ZNF444Q8N0Y2 327 aaPredicted RBP17.08■□□□□ 0.32
DDX55-201ENST00000238146 USP38Q8NB14 1042 aa17.08■□□□□ 0.32
DDX55-201ENST00000238146 DDX12PQ92771 950 aa17.08■□□□□ 0.32
DDX55-201ENST00000238146 CDK5RAP3Q96JB5 506 aa17.08■□□□□ 0.32
DDX55-201ENST00000238146 TSG101Q99816 390 aa17.08■□□□□ 0.32
DDX55-201ENST00000238146 NUDT12Q9BQG2 462 aa17.08■□□□□ 0.32
DDX55-201ENST00000238146 A0A087X0T9 212 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 FAM228BP0C875 321 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 ZCWPW2Q504Y3 356 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 KCNK18Q7Z418 384 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 RAD54LQ92698 747 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 PACSIN1Q9BY11 444 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 TMBIM4Q9HC24 238 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 TMEM260Q9NX78 707 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 TMEM59LQ9UK28 342 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 COL4A3BPQ9Y5P4 624 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 A0A0G2JS52 829 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 FAM107AO95990 144 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 FXR2P51116 673 aaKnown RBP eCLIP17.07■□□□□ 0.32
DDX55-201ENST00000238146 CALCRLQ16602 461 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 FOXR2Q6PJQ5 311 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 DZIP1Q86YF9 867 aaKnown RBP17.07■□□□□ 0.32
DDX55-201ENST00000238146 KLHL7Q8IXQ5 586 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 PROM2Q8N271 834 aa17.07■□□□□ 0.32
DDX55-201ENST00000238146 LSM14BQ9BX40 385 aaKnown RBP17.07■□□□□ 0.32
DDX55-201ENST00000238146 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
DDX55-201ENST00000238146 ROBO3Q96MS0 1386 aa17.06■□□□□ 0.32
DDX55-201ENST00000238146 LOC102724428A0A0B4J2F2 783 aa17.06■□□□□ 0.32
DDX55-201ENST00000238146 POTEMA6NI47 508 aa17.06■□□□□ 0.32
DDX55-201ENST00000238146 SIK1P57059 783 aa17.06■□□□□ 0.32
DDX55-201ENST00000238146 TNNC1P63316 161 aa17.06■□□□□ 0.32
DDX55-201ENST00000238146 FKBP3Q00688 224 aaKnown RBP17.06■□□□□ 0.32
DDX55-201ENST00000238146 PSMD2Q13200 908 aa17.06■□□□□ 0.32
DDX55-201ENST00000238146 ORC2Q13416 577 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms