RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 LRCH2Q5VUJ6 765 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 ENOX1Q8TC92 643 aaKnown RBP13.32□□□□□ -0.28
CHPF2-201ENST00000035307 DYDC1Q8WWB3 177 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 ATRIPQ8WXE1 791 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 PHF20Q9BVI0 1012 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 LSM14BQ9BX40 385 aaKnown RBP13.32□□□□□ -0.28
CHPF2-201ENST00000035307 RGL1Q9NZL6 768 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 PRR12Q9ULL5 1215 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 AHDC1Q5TGY3 1603 aaPredicted RBP13.32□□□□□ -0.28
CHPF2-201ENST00000035307 POTEB3A0JP26 581 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 POTECB2RU33 542 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 STX10O60499 249 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 HPDP32754 393 aaPredicted RBP13.31□□□□□ -0.28
CHPF2-201ENST00000035307 KLHL30Q0D2K2 578 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 POTEBQ6S5H4 581 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 GTPBP4Q9BZE4 634 aaKnown RBP13.31□□□□□ -0.28
CHPF2-201ENST00000035307 ST7Q9NRC1 585 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 DNM3Q9UQ16 869 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 ABCC6O95255 1503 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 MARF1Q9Y4F3 1742 aaKnown RBP13.31□□□□□ -0.28
CHPF2-201ENST00000035307 COL1A1P02452 1464 aaPredicted RBP13.31□□□□□ -0.28
CHPF2-201ENST00000035307 POTEFA5A3E0 1075 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 POTEB2H3BUK9 544 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 SRGAP2O75044 1071 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 POTEIP0CG38 1075 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 NAA35Q5VZE5 725 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 POTEGQ6S5H5 508 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 POTEEQ6S8J3 1075 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 SND1Q7KZF4 910 aaKnown RBP eCLIP13.31□□□□□ -0.285e-7■■■□□ 16.9
CHPF2-201ENST00000035307 C10orf67Q8IYJ2 551 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 RPAP3Q9H6T3 665 aaPredicted RBP13.31□□□□□ -0.28
CHPF2-201ENST00000035307 ZCCHC17Q9NP64 241 aaKnown RBP13.31□□□□□ -0.28
CHPF2-201ENST00000035307 TFR2Q9UP52 801 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 ARHGEF35A5YM69 484 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 HGSO14964 777 aaPredicted RBP13.31□□□□□ -0.28
CHPF2-201ENST00000035307 MAP1SQ66K74 1059 aaPredicted RBP13.31□□□□□ -0.28
CHPF2-201ENST00000035307 SNRNP48Q6IEG0 339 aaKnown RBP13.31□□□□□ -0.28
CHPF2-201ENST00000035307 FAM151AQ8WW52 585 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 VTI1AQ96AJ9 217 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 NAA15Q9BXJ9 866 aaKnown RBP13.31□□□□□ -0.28
CHPF2-201ENST00000035307 SUGCTQ9HAC7 445 aa13.31□□□□□ -0.28
CHPF2-201ENST00000035307 COL16A1Q07092 1604 aaPredicted RBP13.31□□□□□ -0.28
CHPF2-201ENST00000035307 ANKRD62A6NC57 917 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 ADM5C9JUS6 153 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 STXBP3O00186 592 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 CLIC2O15247 247 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 PRCPP42785 496 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 IGBP1P78318 339 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 SMC1AQ14683 1233 aaKnown RBP13.3□□□□□ -0.28
CHPF2-201ENST00000035307 TRIML1Q8N9V2 468 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 ENGASEQ8NFI3 743 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 CYP2W1Q8TAV3 490 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 AGXT2Q9BYV1 514 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 MRPL11Q9Y3B7 192 aaKnown RBP13.3□□□□□ -0.28
CHPF2-201ENST00000035307 CEP104O60308 925 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 CDC25BP30305 580 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 GUCY2FP51841 1108 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 FAM26FQ5R3K3 315 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 E4F1Q66K89 784 aaPredicted RBP13.3□□□□□ -0.28
CHPF2-201ENST00000035307 TTC19Q6DKK2 380 aaPredicted RBP13.3□□□□□ -0.28
CHPF2-201ENST00000035307 WDR24Q96S15 920 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 ZNF577Q9BSK1 485 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 TCHHQ07283 1943 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 NPHP3-ACAD11A0A0J9YXS1 232 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 HSF2BPO75031 334 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 LONP1P36776 959 aaKnown RBP13.3□□□□□ -0.28
CHPF2-201ENST00000035307 CLCN6P51797 869 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 ARHGAP4P98171 946 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 SUPT20HL1Q3ZLR7 823 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 LDHDQ86WU2 507 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 MYOCDQ8IZQ8 938 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 PURBQ96QR8 312 aaKnown RBP13.3□□□□□ -0.28
CHPF2-201ENST00000035307 FUCA2Q9BTY2 467 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 BHMT2Q9H2M3 363 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 CALCOCO1Q9P1Z2 691 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 FBXO2Q9UK22 296 aaPredicted RBP13.3□□□□□ -0.28
CHPF2-201ENST00000035307 SAR1BQ9Y6B6 198 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 LRRC37A3O60309 1634 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 MARK3P27448 753 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 SARM1Q6SZW1 724 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 MIER3Q7Z3K6 550 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 PANK4Q9NVE7 773 aa13.3□□□□□ -0.28
CHPF2-201ENST00000035307 ARFGEF2Q9Y6D5 1785 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 WDR19Q8NEZ3 1342 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 ERCC5P28715 1186 aaPredicted RBP13.29□□□□□ -0.28
CHPF2-201ENST00000035307 CCZ1BP86790 482 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 CCZ1P86791 482 aaPredicted RBP13.29□□□□□ -0.28
CHPF2-201ENST00000035307 BANK1Q8NDB2 785 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 GLG1Q92896 1179 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 FCER1AP12319 257 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 C8orf74Q6P047 294 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 LARP4BQ92615 738 aaKnown RBP13.29□□□□□ -0.28
CHPF2-201ENST00000035307 ATG4CQ96DT6 458 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 DISC1Q9NRI5 854 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 EXOC3O60645 756 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 SLC9C1Q4G0N8 1177 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 HDXQ7Z353 690 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 NLRX1Q86UT6 975 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 TRPM4Q8TD43 1214 aa13.29□□□□□ -0.28
CHPF2-201ENST00000035307 MYO3BQ8WXR4 1341 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms