RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 CDR2Q01850 454 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 TUBB2AQ13885 445 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 SYDE2Q5VT97 1194 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 PI16Q6UXB8 463 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 DSTYKQ6XUX3 929 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 BBS5Q8N3I7 341 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 TRIM58Q8NG06 486 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 ZNF274Q96GC6 653 aaPredicted RBP20.34■□□□□ 0.85
GABPB1-212ENST00000615671 TUBB2BQ9BVA1 445 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 HYOU1Q9Y4L1 999 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 GOLGA8CPA6NN73 597 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 NR2F2P24468 414 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 IREB2P48200 963 aaKnown RBP20.34■□□□□ 0.85
GABPB1-212ENST00000615671 HACD3Q9P035 362 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 KIAA1468Q9P260 1216 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 SOS2Q07890 1332 aaPredicted RBP20.34■□□□□ 0.85
GABPB1-212ENST00000615671 WDR62O43379 1518 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 CCDC93Q567U6 631 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 SLC12A6Q9UHW9 1150 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 TBCKQ8TEA7 893 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 ZNF341Q9BYN7 854 aa20.34■□□□□ 0.85
GABPB1-212ENST00000615671 G3BP2Q9UN86 482 aaKnown RBP20.34■□□□□ 0.85
GABPB1-212ENST00000615671 MAPK4P31152 587 aa20.33■□□□□ 0.85
GABPB1-212ENST00000615671 RWDD4Q6NW29 188 aaKnown RBP20.33■□□□□ 0.85
GABPB1-212ENST00000615671 KCTD6Q8NC69 237 aa20.33■□□□□ 0.85
GABPB1-212ENST00000615671 PCDHA4Q9UN74 947 aa20.33■□□□□ 0.85
GABPB1-212ENST00000615671 ZNF18P17022 549 aa20.33■□□□□ 0.85
GABPB1-212ENST00000615671 SOX5P35711 763 aa20.33■□□□□ 0.85
GABPB1-212ENST00000615671 MUM1Q2TAK8 710 aa20.33■□□□□ 0.85
GABPB1-212ENST00000615671 CHAMP1Q96JM3 812 aa20.33■□□□□ 0.85
GABPB1-212ENST00000615671 MLH3Q9UHC1 1453 aa20.33■□□□□ 0.85
GABPB1-212ENST00000615671 USP17L3A6NCW0 530 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 USP17L4A6NCW7 530 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 ENC1O14682 589 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 KRT1P04264 644 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 ZNF853P0CG23 659 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 LTKP29376 864 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 CDC25AP30304 524 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 USP17L1Q7RTZ2 530 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 HSPH1Q92598 858 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 LRGUKQ96M69 825 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 USP44Q9H0E7 712 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 BMP3P12645 472 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 MX2P20592 715 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 ANTXR1Q9H6X2 564 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 LRRC4Q9HBW1 653 aa20.33■□□□□ 0.84
GABPB1-212ENST00000615671 OPHN1O60890 802 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 PDE8BO95263 885 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 COG7P83436 770 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 CTTNQ14247 550 aaKnown RBP20.32■□□□□ 0.84
GABPB1-212ENST00000615671 RAB44Q7Z6P3 723 aaPredicted RBP20.32■□□□□ 0.84
GABPB1-212ENST00000615671 ZNF215Q9UL58 517 aaPredicted RBP20.32■□□□□ 0.84
GABPB1-212ENST00000615671 SRGAP2BP0DMP2 458 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 LCORLQ8N3X6 602 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 CDKL2Q92772 493 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 ACCSQ96QU6 501 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 TSR3Q9UJK0 312 aaKnown RBP20.32■□□□□ 0.84
GABPB1-212ENST00000615671 GTPBP6O43824 516 aaPredicted RBP20.32■□□□□ 0.84
GABPB1-212ENST00000615671 GNGT1P63211 74 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.32■□□□□ 0.84
GABPB1-212ENST00000615671 SIX6OS1Q8N1H7 587 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 CALN1Q9BXU9 219 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 UBE2TQ9NPD8 197 aaPredicted RBP20.32■□□□□ 0.84
GABPB1-212ENST00000615671 INHBAP08476 426 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 DBN1Q16643 649 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 DARS2Q6PI48 645 aaKnown RBP20.32■□□□□ 0.84
GABPB1-212ENST00000615671 C1orf228Q6PIY5 440 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 ZNF668Q96K58 619 aaPredicted RBP20.32■□□□□ 0.84
GABPB1-212ENST00000615671 ATP10AO60312 1499 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 A0A087WWV3 80 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 SFI1A8K8P3 1242 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 ZBBXA8MT70 800 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 GSPT1P15170 499 aaKnown RBP20.32■□□□□ 0.84
GABPB1-212ENST00000615671 LARP4BQ92615 738 aaKnown RBP20.32■□□□□ 0.84
GABPB1-212ENST00000615671 NACC1Q96RE7 527 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 MIS12Q9H081 205 aa20.32■□□□□ 0.84
GABPB1-212ENST00000615671 EEF1GP26641 437 aaKnown RBP20.31■□□□□ 0.84
GABPB1-212ENST00000615671 HABP4Q5JVS0 413 aaKnown RBP20.31■□□□□ 0.84
GABPB1-212ENST00000615671 PSPC1Q8WXF1 523 aaKnown RBP20.31■□□□□ 0.84
GABPB1-212ENST00000615671 HVCN1Q96D96 273 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 PCDHA7Q9UN72 937 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 SEMA3EO15041 775 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 THOC5Q13769 683 aaKnown RBP20.31■□□□□ 0.84
GABPB1-212ENST00000615671 ZNF449Q6P9G9 518 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 RASSF4Q9H2L5 321 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 PDIA3P30101 505 aaKnown RBP20.31■□□□□ 0.84
GABPB1-212ENST00000615671 PSMC2P35998 433 aaKnown RBP20.31■□□□□ 0.84
GABPB1-212ENST00000615671 SZRD1Q7Z422 152 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 RNF139Q8WU17 664 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 F5H423 210 aaPredicted RBP20.31■□□□□ 0.84
GABPB1-212ENST00000615671 GFPT2O94808 682 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 CPP00450 1065 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 ASPRV1Q53RT3 343 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 MAP7D3Q8IWC1 876 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 LEMD3Q9Y2U8 911 aa20.31■□□□□ 0.84
GABPB1-212ENST00000615671 SYNDIG1LA6NDD5 238 aa20.3■□□□□ 0.84
GABPB1-212ENST00000615671 BASP1P80723 227 aaKnown RBP20.3■□□□□ 0.84
GABPB1-212ENST00000615671 MCTP2Q6DN12 878 aa20.3■□□□□ 0.84
GABPB1-212ENST00000615671 CACTINQ8WUQ7 758 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms