RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CYP2W1Q8TAV3 490 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 TAF4BQ92750 862 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 PARD6BQ9BYG5 372 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 VPS18Q9P253 973 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 DUSP10Q9Y6W6 482 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 TMEM110-MUSTN1A8MSY1 372 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 RNF225M0QZC1 329 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-217ENST00000584582 PPP1R12BO60237 982 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-217ENST00000584582 NDUFB10O96000 172 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 PLEKP08567 350 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-217ENST00000584582 ZNF18P17022 549 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 NR2F2P24468 414 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 APBA1Q02410 837 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 TMEM132AQ24JP5 1023 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 PODNQ7Z5L7 613 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 CEP112Q8N8E3 955 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 CCDC17Q96LX7 622 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 ALS2CR12Q96Q35 445 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 NDST4Q9H3R1 872 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 SLC27A3Q5K4L6 730 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 KSR1Q8IVT5 923 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 ACER1Q8TDN7 264 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 CNKSR1Q969H4 720 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 AK8Q96MA6 479 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 LRRC27Q9C0I9 530 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
TOP3A-217ENST00000584582 SWAP70Q9UH65 585 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 EIF4A3P38919 411 aaKnown RBP12.51□□□□□ -0.41
TOP3A-217ENST00000584582 ARHGAP4P98171 946 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 HAUS3Q68CZ6 603 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 KCNK18Q7Z418 384 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 SECISBP2LQ93073 1101 aaKnown RBP12.51□□□□□ -0.41
TOP3A-217ENST00000584582 NHEJ1Q9H9Q4 299 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-217ENST00000584582 MYO6Q9UM54 1294 aa12.51□□□□□ -0.41
TOP3A-217ENST00000584582 BAZ2AQ9UIF9 1905 aaKnown RBP12.51□□□□□ -0.41
TOP3A-217ENST00000584582 PLEKHG2Q9H7P9 1386 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 KIF20AO95235 890 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 SYDE2Q5VT97 1194 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 TBC1D5Q92609 795 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 TESPA1A2RU30 521 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-217ENST00000584582 LGALS16A8MUM7 142 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 MOCS3O95396 460 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 ERVK-24P63145 666 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 KLHL30Q0D2K2 578 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 EZH2Q15910 746 aaKnown RBP12.5□□□□□ -0.41
TOP3A-217ENST00000584582 ADAT2Q7Z6V5 191 aaKnown RBP12.5□□□□□ -0.41
TOP3A-217ENST00000584582 GSPT2Q8IYD1 628 aaKnown RBP12.5□□□□□ -0.41
TOP3A-217ENST00000584582 DHTKD1Q96HY7 919 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-217ENST00000584582 PANX2Q96RD6 677 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 TMEM39BQ9GZU3 492 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 SMARCAL1Q9NZC9 954 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 HARSP12081 509 aaKnown RBP12.5□□□□□ -0.41
TOP3A-217ENST00000584582 ABCB4P21439 1286 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 EEF1GP26641 437 aaKnown RBP12.5□□□□□ -0.41
TOP3A-217ENST00000584582 SSR1P43307 286 aaKnown RBP12.5□□□□□ -0.41
TOP3A-217ENST00000584582 NAALADL2Q58DX5 795 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 NIM1KQ8IY84 436 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 PCIF1Q9H4Z3 704 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 SUGCTQ9HAC7 445 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 MLXIPQ9HAP2 919 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 EMILIN3Q9NT22 766 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 SAR1BQ9Y6B6 198 aa12.5□□□□□ -0.41
TOP3A-217ENST00000584582 CCDC169A6NNP5 214 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 LAD1O00515 517 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 SHMT1P34896 483 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 TRIM14Q14142 442 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 LRCH2Q5VUJ6 765 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 FAM133AQ8N9E0 248 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 NAA15Q9BXJ9 866 aaKnown RBP12.49□□□□□ -0.41
TOP3A-217ENST00000584582 ADAMTS1Q9UHI8 967 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 CDC23Q9UJX2 597 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 SPATA31A6Q5VVP1 1343 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 ROBO1Q9Y6N7 1651 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 EFCAB8A8MWE9 144 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 ZNF185O15231 689 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 IL1R1P14778 569 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 IBSPP21815 317 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-217ENST00000584582 TTLL12Q14166 644 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-217ENST00000584582 TNIP1Q15025 636 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 APOBEC3HQ6NTF7 200 aaKnown RBP12.49□□□□□ -0.41
TOP3A-217ENST00000584582 HS2ST1Q7LGA3 356 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 CCSER1Q9C0I3 900 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-217ENST00000584582 ARHGEF35A5YM69 484 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 EIF3JO75822 258 aaKnown RBP12.49□□□□□ -0.41
TOP3A-217ENST00000584582 FLOT1O75955 427 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 STAT2P52630 851 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 E2F4Q16254 413 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 UTP14CQ5TAP6 766 aaKnown RBP12.49□□□□□ -0.41
TOP3A-217ENST00000584582 TNFRSF25Q93038 417 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 CCPG1Q9ULG6 757 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 PHLPP2Q6ZVD8 1323 aa12.49□□□□□ -0.41
TOP3A-217ENST00000584582 FTCDO95954 541 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 EIF2AK2P19525 551 aaKnown RBP12.48□□□□□ -0.41
TOP3A-217ENST00000584582 SLC7A5Q01650 507 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 COASYQ13057 564 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 GRB10Q13322 594 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 SFR1Q86XK3 245 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 RAD54LQ92698 747 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 NT5C3AQ9H0P0 336 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms