RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 PLCD4Q9BRC7 762 aa6.79□□□□□ -1.32
KARSP3-201ENST00000571212 HIRIP3Q9BW71 556 aaPredicted RBP6.79□□□□□ -1.32
KARSP3-201ENST00000571212 ZNF552Q9H707 407 aaPredicted RBP6.79□□□□□ -1.32
KARSP3-201ENST00000571212 PRDM11Q9NQV5 511 aa6.79□□□□□ -1.32
KARSP3-201ENST00000571212 AUHQ13825 339 aaKnown RBP6.78□□□□□ -1.32
KARSP3-201ENST00000571212 R3HDM1Q15032 1099 aaKnown RBP6.78□□□□□ -1.32
KARSP3-201ENST00000571212 SNX17Q15036 470 aa6.78□□□□□ -1.32
KARSP3-201ENST00000571212 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
KARSP3-201ENST00000571212 ADGRF1Q5T601 910 aa6.78□□□□□ -1.32
KARSP3-201ENST00000571212 BCL11AQ9H165 835 aa6.78□□□□□ -1.32
KARSP3-201ENST00000571212 PHRF1Q9P1Y6 1649 aaKnown RBP6.78□□□□□ -1.32
KARSP3-201ENST00000571212 PARD3Q8TEW0 1356 aa6.78□□□□□ -1.32
KARSP3-201ENST00000571212 SPATA31A1Q5TZJ5 1347 aa6.77□□□□□ -1.33
KARSP3-201ENST00000571212 ARHGEF28Q8N1W1 1705 aaKnown RBP6.77□□□□□ -1.33
KARSP3-201ENST00000571212 NRDCO43847 1150 aa6.77□□□□□ -1.33
KARSP3-201ENST00000571212 LINC00310P59036 64 aa6.77□□□□□ -1.33
KARSP3-201ENST00000571212 RACK1P63244 317 aaKnown RBP6.77□□□□□ -1.33
KARSP3-201ENST00000571212 DLG4P78352 724 aa6.77□□□□□ -1.33
KARSP3-201ENST00000571212 EZH2Q15910 746 aaKnown RBP6.77□□□□□ -1.33
KARSP3-201ENST00000571212 TDRD10Q5VZ19 366 aaKnown RBP6.77□□□□□ -1.33
KARSP3-201ENST00000571212 CAMKK2Q96RR4 588 aa6.77□□□□□ -1.33
KARSP3-201ENST00000571212 ZNRF3Q9ULT6 936 aa6.77□□□□□ -1.33
KARSP3-201ENST00000571212 PCDHB12Q9Y5F1 795 aa6.77□□□□□ -1.33
KARSP3-201ENST00000571212 ATP7BP35670 1465 aa6.77□□□□□ -1.33
KARSP3-201ENST00000571212 KIAA0232Q92628 1395 aa6.77□□□□□ -1.33
KARSP3-201ENST00000571212 RREB1Q92766 1687 aa6.77□□□□□ -1.33
KARSP3-201ENST00000571212 KIR2DL1P43626 348 aaPredicted RBP6.76□□□□□ -1.33
KARSP3-201ENST00000571212 KIR2DL2P43627 348 aaPredicted RBP6.76□□□□□ -1.33
KARSP3-201ENST00000571212 ZYXQ15942 572 aaKnown RBP6.76□□□□□ -1.33
KARSP3-201ENST00000571212 FBXW10Q5XX13 1052 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 CRTC3Q6UUV7 619 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 RUFY4Q6ZNE9 571 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 IRF2BPLQ9H1B7 796 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 GCM1Q9NP62 436 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 FAM86C1Q9NVL1 165 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 SUCOQ9UBS9 1254 aaKnown RBP6.76□□□□□ -1.33
KARSP3-201ENST00000571212 PPT2Q9UMR5 302 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 SHOXO15266 292 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 NUAK1O60285 661 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 RTP1P59025 263 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 CHRNA2Q15822 529 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 DCAF15Q66K64 600 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 CIAPIN1Q6FI81 312 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 PPFIBP1Q86W92 1011 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 CCDC144CPQ8IYA2 1237 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 SIN3AQ96ST3 1273 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 CDADC1Q9BWV3 514 aa6.76□□□□□ -1.33
KARSP3-201ENST00000571212 GPR55Q9Y2T6 319 aaPredicted RBP6.76□□□□□ -1.33
KARSP3-201ENST00000571212 NUP188Q5SRE5 1749 aa6.75□□□□□ -1.33
KARSP3-201ENST00000571212 TOPAZ1Q8N9V7 1692 aa6.75□□□□□ -1.33
KARSP3-201ENST00000571212 OR14I1A6ND48 311 aa6.75□□□□□ -1.33
KARSP3-201ENST00000571212 FADS2P1A8MWK0 482 aa6.75□□□□□ -1.33
KARSP3-201ENST00000571212 PEX10O60683 326 aa6.75□□□□□ -1.33
KARSP3-201ENST00000571212 SIAH1Q8IUQ4 282 aa6.75□□□□□ -1.33
KARSP3-201ENST00000571212 FERD3LQ96RJ6 166 aa6.75□□□□□ -1.33
KARSP3-201ENST00000571212 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
KARSP3-201ENST00000571212 POLR3AO14802 1390 aaPredicted RBP6.74□□□□□ -1.33
KARSP3-201ENST00000571212 SSH2Q76I76 1423 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 LMO7Q8WWI1 1683 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 TEX51A0A1B0GUA7 166 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 ZNF205O95201 554 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 TP53P04637 393 aaPredicted RBP6.74□□□□□ -1.33
KARSP3-201ENST00000571212 VAV1P15498 845 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 EVA1CP58658 441 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 ZC3H6P61129 1189 aaKnown RBP6.74□□□□□ -1.33
KARSP3-201ENST00000571212 NBPF8Q3BBV2 869 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 HSF5Q4G112 596 aaPredicted RBP6.74□□□□□ -1.33
KARSP3-201ENST00000571212 INTS3Q68E01 1043 aaKnown RBP6.74□□□□□ -1.33
KARSP3-201ENST00000571212 C7orf61Q8IZ16 206 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 TMEM52Q8NDY8 209 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 RNF34Q969K3 372 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 FCRL2Q96LA5 508 aaPredicted RBP6.74□□□□□ -1.33
KARSP3-201ENST00000571212 ERVK13-1Q9NX77 482 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 CPDO75976 1380 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 PARP4Q9UKK3 1724 aaKnown RBP6.74□□□□□ -1.33
KARSP3-201ENST00000571212 KIAA1210Q9ULL0 1709 aa6.74□□□□□ -1.33
KARSP3-201ENST00000571212 NRKQ7Z2Y5 1582 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 ACEP12821 1306 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 CAMTA1Q9Y6Y1 1673 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 SEMA7AO75326 666 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 BMP8BP34820 402 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 SRSF3P84103 164 aaKnown RBP6.73□□□□□ -1.33
KARSP3-201ENST00000571212 AXDND1Q5T1B0 1012 aaPredicted RBP6.73□□□□□ -1.33
KARSP3-201ENST00000571212 CCDC81Q6ZN84 652 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 AMIGO3Q86WK7 504 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 TCP11L2Q8N4U5 519 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 BRF1Q92994 677 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 DSCC1Q9BVC3 393 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 CDK19Q9BWU1 502 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 DDX41Q9UJV9 622 aaKnown RBP6.73□□□□□ -1.33
KARSP3-201ENST00000571212 THRAP3Q9Y2W1 955 aaKnown RBP6.73□□□□□ -1.33
KARSP3-201ENST00000571212 SBF2Q86WG5 1849 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 USP19O94966 1318 aa6.73□□□□□ -1.33
KARSP3-201ENST00000571212 RECKO95980 971 aa6.72□□□□□ -1.33
KARSP3-201ENST00000571212 PMS1P54277 932 aaKnown RBP6.72□□□□□ -1.33
KARSP3-201ENST00000571212 SSPNQ14714 243 aa6.72□□□□□ -1.33
KARSP3-201ENST00000571212 RTP2Q5QGT7 225 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms