RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ZNRF3Q9ULT6 936 aa18.68■□□□□ 0.58
CMTM3-213ENST00000566756 GUCA1BQ9UMX6 200 aa18.68■□□□□ 0.58
CMTM3-213ENST00000566756 SMCO2A6NFE2 343 aa18.68■□□□□ 0.58
CMTM3-213ENST00000566756 B4DLN1 442 aa18.68■□□□□ 0.58
CMTM3-213ENST00000566756 IPO7O95373 1038 aaKnown RBP18.68■□□□□ 0.58
CMTM3-213ENST00000566756 HNRNPH3P31942 346 aaKnown RBP18.68■□□□□ 0.58
CMTM3-213ENST00000566756 TBC1D8BQ0IIM8 1120 aa18.68■□□□□ 0.58
CMTM3-213ENST00000566756 MUM1L1Q5H9M0 696 aa18.68■□□□□ 0.58
CMTM3-213ENST00000566756 CALML4Q96GE6 196 aa18.68■□□□□ 0.58
CMTM3-213ENST00000566756 PURBQ96QR8 312 aaKnown RBP18.68■□□□□ 0.58
CMTM3-213ENST00000566756 TSGA10Q9BZW7 698 aa18.68■□□□□ 0.58
CMTM3-213ENST00000566756 ACBD3Q9H3P7 528 aa18.68■□□□□ 0.58
CMTM3-213ENST00000566756 ABCB6Q9NP58 842 aa18.68■□□□□ 0.58
CMTM3-213ENST00000566756 SEC63Q9UGP8 760 aaKnown RBP18.68■□□□□ 0.58
CMTM3-213ENST00000566756 SAR1BQ9Y6B6 198 aa18.68■□□□□ 0.58
CMTM3-213ENST00000566756 PVALEFA0A1B0GWK0 134 aa18.67■□□□□ 0.58
CMTM3-213ENST00000566756 TARSL2A2RTX5 802 aaKnown RBP18.67■□□□□ 0.58
CMTM3-213ENST00000566756 CCNT1O60563 726 aaKnown RBP18.67■□□□□ 0.58
CMTM3-213ENST00000566756 ENTPD3O75355 529 aa18.67■□□□□ 0.58
CMTM3-213ENST00000566756 TRIM21P19474 475 aaKnown RBP18.67■□□□□ 0.58
CMTM3-213ENST00000566756 CCDC122Q5T0U0 273 aa18.67■□□□□ 0.58
CMTM3-213ENST00000566756 VIPAS39Q9H9C1 493 aa18.67■□□□□ 0.58
CMTM3-213ENST00000566756 FAM198AQ9UFP1 575 aa18.67■□□□□ 0.58
CMTM3-213ENST00000566756 PCDHAC2Q9Y5I4 1007 aa18.67■□□□□ 0.58
CMTM3-213ENST00000566756 IGKV6D-41A0A0C4DH26 115 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 FXR2P51116 673 aaKnown RBP eCLIP18.66■□□□□ 0.58
CMTM3-213ENST00000566756 VSNL1P62760 191 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 ASIC1P78348 528 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 LETM2Q2VYF4 491 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 FKBP15Q5T1M5 1219 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 ANKRD40Q6AI12 368 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 CENPPQ6IPU0 288 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 NIM1KQ8IY84 436 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 JAKMIP2Q96AA8 810 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 CEP95Q96GE4 821 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 RIOX1Q9H6W3 641 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 HDAC9Q9UKV0 1011 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 RASSF10A6NK89 507 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 PES1O00541 588 aaKnown RBP18.66■□□□□ 0.58
CMTM3-213ENST00000566756 FGFR1OPO95684 399 aaKnown RBP18.66■□□□□ 0.58
CMTM3-213ENST00000566756 SHMT1P34896 483 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 USP14P54578 494 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 MIIPQ5JXC2 388 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 KIAA1328Q86T90 577 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 AGBL3Q8NEM8 1001 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 CCDC17Q96LX7 622 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 PI4KBQ9UBF8 816 aa18.66■□□□□ 0.58
CMTM3-213ENST00000566756 ATRNL1Q5VV63 1379 aa18.65■□□□□ 0.58
CMTM3-213ENST00000566756 ERICH4A6NGS2 130 aa18.65■□□□□ 0.58
CMTM3-213ENST00000566756 H3BQF6 201 aa18.65■□□□□ 0.58
CMTM3-213ENST00000566756 MTIF2P46199 727 aaKnown RBP18.65■□□□□ 0.58
CMTM3-213ENST00000566756 STK4Q13043 487 aa18.65■□□□□ 0.58
CMTM3-213ENST00000566756 ARHGAP27Q6ZUM4 889 aa18.65■□□□□ 0.58
CMTM3-213ENST00000566756 REXO1Q8N1G1 1221 aaKnown RBP18.65■□□□□ 0.58
CMTM3-213ENST00000566756 MTMR9Q96QG7 549 aa18.65■□□□□ 0.58
CMTM3-213ENST00000566756 MMTAG2Q9BU76 263 aaKnown RBP18.65■□□□□ 0.58
CMTM3-213ENST00000566756 NOC4LQ9BVI4 516 aaKnown RBP18.65■□□□□ 0.58
CMTM3-213ENST00000566756 LRRC27Q9C0I9 530 aa18.65■□□□□ 0.58
CMTM3-213ENST00000566756 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
CMTM3-213ENST00000566756 NHEJ1Q9H9Q4 299 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-213ENST00000566756 ZCCHC17Q9NP64 241 aaKnown RBP18.65■□□□□ 0.58
CMTM3-213ENST00000566756 MTMR4Q9NYA4 1195 aa18.65■□□□□ 0.58
CMTM3-213ENST00000566756 ADAM21Q9UKJ8 722 aa18.65■□□□□ 0.58
CMTM3-213ENST00000566756 ARFGEF1Q9Y6D6 1849 aa18.65■□□□□ 0.58
CMTM3-213ENST00000566756 RAD17O75943 681 aa18.64■□□□□ 0.58
CMTM3-213ENST00000566756 RHOXF2BP0C7M4 288 aa18.64■□□□□ 0.58
CMTM3-213ENST00000566756 CASP8Q14790 479 aa18.64■□□□□ 0.58
CMTM3-213ENST00000566756 MAP9Q49MG5 647 aa18.64■□□□□ 0.58
CMTM3-213ENST00000566756 UNC13DQ70J99 1090 aa18.64■□□□□ 0.58
CMTM3-213ENST00000566756 SV2BQ7L1I2 683 aa18.64■□□□□ 0.58
CMTM3-213ENST00000566756 ZFPM1Q8IX07 1006 aa18.64■□□□□ 0.58
CMTM3-213ENST00000566756 NOA1Q8NC60 698 aaKnown RBP18.64■□□□□ 0.58
CMTM3-213ENST00000566756 PRMT6Q96LA8 375 aaPredicted RBP18.64■□□□□ 0.58
CMTM3-213ENST00000566756 RHOXF2Q9BQY4 288 aa18.64■□□□□ 0.58
CMTM3-213ENST00000566756 MED4Q9NPJ6 270 aa18.64■□□□□ 0.58
CMTM3-213ENST00000566756 MYH4Q9Y623 1939 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 GOLGA8HP0CJ92 632 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 VAV2P52735 878 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 PDIA5Q14554 519 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 NCAPH2Q6IBW4 605 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 OGFOD1Q8N543 542 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 MTMR14Q8NCE2 650 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 TBCKQ8TEA7 893 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 PLIN2Q99541 437 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 RAB34Q9BZG1 259 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 TDRD3Q9H7E2 651 aaKnown RBP18.64■□□□□ 0.57
CMTM3-213ENST00000566756 PDE11AQ9HCR9 933 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 AGPAT5Q9NUQ2 364 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 TRIM10Q9UDY6 481 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 LTBP3Q9NS15 1303 aa18.64■□□□□ 0.57
CMTM3-213ENST00000566756 SPDYE2BA6NHP3 402 aa18.63■□□□□ 0.57
CMTM3-213ENST00000566756 SPDYE6P0CI01 402 aa18.63■□□□□ 0.57
CMTM3-213ENST00000566756 AKR1B1P15121 316 aa18.63■□□□□ 0.57
CMTM3-213ENST00000566756 PTGER2P43116 358 aa18.63■□□□□ 0.57
CMTM3-213ENST00000566756 MMP14P50281 582 aa18.63■□□□□ 0.57
CMTM3-213ENST00000566756 IQCEQ6IPM2 695 aa18.63■□□□□ 0.57
CMTM3-213ENST00000566756 PPP1R18Q6NYC8 613 aa18.63■□□□□ 0.57
CMTM3-213ENST00000566756 GUF1Q8N442 669 aaKnown RBP18.63■□□□□ 0.57
CMTM3-213ENST00000566756 KIAA0895Q8NCT3 520 aa18.63■□□□□ 0.57
CMTM3-213ENST00000566756 FAM71BQ8TC56 605 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms