RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 GBP3Q9H0R5 595 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 GP6Q9HCN6 339 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 PRR13Q9NZ81 148 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 APEX2Q9UBZ4 518 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 SUGT1Q9Y2Z0 365 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 TBX22Q9Y458 520 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 KDM2BQ8NHM5 1336 aa6.62□□□□□ -1.35
CHD9-215ENST00000565442 F8W031 263 aaPredicted RBP6.62□□□□□ -1.35
CHD9-215ENST00000565442 GSNP06396 782 aa6.62□□□□□ -1.35
CHD9-215ENST00000565442 NAT2P11245 290 aa6.62□□□□□ -1.35
CHD9-215ENST00000565442 ZNF143P52747 638 aaPredicted RBP6.62□□□□□ -1.35
CHD9-215ENST00000565442 NOL9Q5SY16 702 aaKnown RBP6.62□□□□□ -1.35
CHD9-215ENST00000565442 B3GNT8Q7Z7M8 397 aa6.62□□□□□ -1.35
CHD9-215ENST00000565442 KANSL2Q9H9L4 492 aa6.62□□□□□ -1.35
CHD9-215ENST00000565442 PDLIM7Q9NR12 457 aa6.62□□□□□ -1.35
CHD9-215ENST00000565442 LRP2BPQ9P2M1 347 aa6.62□□□□□ -1.35
CHD9-215ENST00000565442 PPM1BO75688 479 aa6.61□□□□□ -1.35
CHD9-215ENST00000565442 ASGR2P07307 311 aa6.61□□□□□ -1.35
CHD9-215ENST00000565442 GSTM1P09488 218 aa6.61□□□□□ -1.35
CHD9-215ENST00000565442 C6P13671 934 aa6.61□□□□□ -1.35
CHD9-215ENST00000565442 ZNF445P59923 1031 aa6.61□□□□□ -1.35
CHD9-215ENST00000565442 ZNF761Q86XN6 746 aaPredicted RBP6.61□□□□□ -1.35
CHD9-215ENST00000565442 SH3TC2Q8TF17 1288 aa6.61□□□□□ -1.35
CHD9-215ENST00000565442 RNPC3Q96LT9 517 aaKnown RBP6.61□□□□□ -1.35
CHD9-215ENST00000565442 SLC12A9Q9BXP2 914 aa6.61□□□□□ -1.35
CHD9-215ENST00000565442 EPN3Q9H201 632 aa6.61□□□□□ -1.35
CHD9-215ENST00000565442 WHRNQ9P202 907 aa6.61□□□□□ -1.35
CHD9-215ENST00000565442 DBR1Q9UK59 544 aaKnown RBP6.61□□□□□ -1.35
CHD9-215ENST00000565442 AGRPO00253 132 aa6.6□□□□□ -1.35
CHD9-215ENST00000565442 ITGA4P13612 1032 aa6.6□□□□□ -1.35
CHD9-215ENST00000565442 SARSP49591 514 aaKnown RBP6.6□□□□□ -1.35
CHD9-215ENST00000565442 CYP2R1Q6VVX0 501 aa6.6□□□□□ -1.35
CHD9-215ENST00000565442 ZNF513Q8N8E2 541 aaPredicted RBP6.6□□□□□ -1.35
CHD9-215ENST00000565442 ALG3Q92685 438 aa6.6□□□□□ -1.35
CHD9-215ENST00000565442 DSCC1Q9BVC3 393 aa6.6□□□□□ -1.35
CHD9-215ENST00000565442 SPATA9Q9BWV2 254 aa6.6□□□□□ -1.35
CHD9-215ENST00000565442 NOL6Q9H6R4 1146 aaKnown RBP6.6□□□□□ -1.35
CHD9-215ENST00000565442 NTMQ9P121 344 aa6.6□□□□□ -1.35
CHD9-215ENST00000565442 PLATP00750 562 aa6.59□□□□□ -1.35
CHD9-215ENST00000565442 ITGAVP06756 1048 aa6.59□□□□□ -1.35
CHD9-215ENST00000565442 TACR2P21452 398 aa6.59□□□□□ -1.35
CHD9-215ENST00000565442 GDF5P43026 501 aa6.59□□□□□ -1.35
CHD9-215ENST00000565442 CORO7P57737 925 aa6.59□□□□□ -1.35
CHD9-215ENST00000565442 PPP2R5DQ14738 602 aa6.59□□□□□ -1.35
CHD9-215ENST00000565442 SDE2Q6IQ49 451 aa6.59□□□□□ -1.35
CHD9-215ENST00000565442 FAM177A1Q8N128 213 aaPredicted RBP6.59□□□□□ -1.35
CHD9-215ENST00000565442 FIBCD1Q8N539 461 aa6.59□□□□□ -1.35
CHD9-215ENST00000565442 BVESQ8NE79 360 aa6.59□□□□□ -1.35
CHD9-215ENST00000565442 ZNF669Q96BR6 464 aaPredicted RBP6.59□□□□□ -1.35
CHD9-215ENST00000565442 AKT3Q9Y243 479 aa6.59□□□□□ -1.35
CHD9-215ENST00000565442 A0A1W2PQU0 124 aa6.58□□□□□ -1.36
CHD9-215ENST00000565442 IQCA1LA6NCM1 817 aa6.58□□□□□ -1.36
CHD9-215ENST00000565442 TBX1O43435 398 aa6.58□□□□□ -1.36
CHD9-215ENST00000565442 FAM153BP0C7A2 387 aa6.58□□□□□ -1.36
CHD9-215ENST00000565442 TACR1P25103 407 aa6.58□□□□□ -1.36
CHD9-215ENST00000565442 TBC1D10BQ4KMP7 808 aaPredicted RBP6.58□□□□□ -1.36
CHD9-215ENST00000565442 CWF19L1Q69YN2 538 aaKnown RBP6.58□□□□□ -1.36
CHD9-215ENST00000565442 ZNF227Q86WZ6 799 aa6.58□□□□□ -1.36
CHD9-215ENST00000565442 LRRC47Q8N1G4 583 aaKnown RBP6.58□□□□□ -1.36
CHD9-215ENST00000565442 THAP3Q8WTV1 239 aaPredicted RBP6.58□□□□□ -1.36
CHD9-215ENST00000565442 ZDHHC15Q96MV8 337 aa6.58□□□□□ -1.36
CHD9-215ENST00000565442 MENTQ9BUN1 341 aa6.58□□□□□ -1.36
CHD9-215ENST00000565442 MRIQ9BWK5 157 aa6.58□□□□□ -1.36
CHD9-215ENST00000565442 CGGBP1Q9UFW8 167 aaPredicted RBP6.58□□□□□ -1.36
CHD9-215ENST00000565442 FHOD1Q9Y613 1164 aa6.58□□□□□ -1.36
CHD9-215ENST00000565442 CADPSQ9ULU8 1353 aa6.57□□□□□ -1.36
CHD9-215ENST00000565442 A0A087WZG4 1122 aa6.57□□□□□ -1.36
CHD9-215ENST00000565442 ESYT3A0FGR9 886 aa6.57□□□□□ -1.36
CHD9-215ENST00000565442 NOP56O00567 594 aaKnown RBP6.57□□□□□ -1.36
CHD9-215ENST00000565442 FGF10O15520 208 aaPredicted RBP6.57□□□□□ -1.36
CHD9-215ENST00000565442 ADCY3O60266 1144 aa6.57□□□□□ -1.36
CHD9-215ENST00000565442 SLPIP03973 132 aa6.57□□□□□ -1.36
CHD9-215ENST00000565442 PMLP29590 882 aa6.57□□□□□ -1.36
CHD9-215ENST00000565442 PPP2R2AP63151 447 aa6.57□□□□□ -1.36
CHD9-215ENST00000565442 C2orf27AQ580R0 203 aa6.57□□□□□ -1.36
CHD9-215ENST00000565442 DVL3Q92997 716 aaPredicted RBP6.57□□□□□ -1.36
CHD9-215ENST00000565442 SGSM3Q96HU1 749 aa6.57□□□□□ -1.36
CHD9-215ENST00000565442 RCC1LQ96I51 464 aaKnown RBP6.57□□□□□ -1.36
CHD9-215ENST00000565442 NOX5Q96PH1 765 aa6.57□□□□□ -1.36
CHD9-215ENST00000565442 FANCLQ9NW38 375 aa6.57□□□□□ -1.36
CHD9-215ENST00000565442 SPATA6Q9NWH7 488 aaPredicted RBP6.57□□□□□ -1.36
CHD9-215ENST00000565442 VAMP4O75379 141 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 KCNH1O95259 989 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 GRIA2P42262 883 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 SQSTM1Q13501 440 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 YOD1Q5VVQ6 348 aaPredicted RBP6.56□□□□□ -1.36
CHD9-215ENST00000565442 TTLL7Q6ZT98 887 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 Q8N1X5 172 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 ARHGEF39Q8N4T4 335 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 ZBTB38Q8NAP3 1195 aaPredicted RBP6.56□□□□□ -1.36
CHD9-215ENST00000565442 CHST13Q8NET6 341 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 SMARCC2Q8TAQ2 1214 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 ADAMTS17Q8TE56 1095 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 ARHGEF4Q9NR80 690 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 DIS3Q9Y2L1 958 aaKnown RBP6.56□□□□□ -1.36
CHD9-215ENST00000565442 EMC9Q9Y3B6 208 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 PTCH2Q9Y6C5 1203 aa6.56□□□□□ -1.36
CHD9-215ENST00000565442 H0Y8X5 98 aa6.55□□□□□ -1.36
CHD9-215ENST00000565442 CYR61O00622 381 aa6.55□□□□□ -1.36
CHD9-215ENST00000565442 GLI4P10075 376 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms