RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 NRDCO43847 1150 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 STX10O60499 249 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 GYPCP04921 128 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 RPS12P25398 132 aaKnown RBP15.86■□□□□ 0.13
LDB3-207ENST00000542786 EEF1GP26641 437 aaKnown RBP15.86■□□□□ 0.13
LDB3-207ENST00000542786 PPP1R2P41236 205 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 RBL2Q08999 1139 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 STIM1Q13586 685 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 TNIP1Q15025 636 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 FILIP1LQ4L180 1135 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 ZNF507Q8TCN5 953 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 NOC3LQ8WTT2 800 aaKnown RBP15.86■□□□□ 0.13
LDB3-207ENST00000542786 CCDC47Q96A33 483 aaKnown RBP15.86■□□□□ 0.13
LDB3-207ENST00000542786 LGALS16A8MUM7 142 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 AKR1B15C9JRZ8 316 aaPredicted RBP15.85■□□□□ 0.13
LDB3-207ENST00000542786 MFAP3LO75121 409 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 POLD1P28340 1107 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
LDB3-207ENST00000542786 RASA3Q14644 834 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 ANKRD40Q6AI12 368 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 CENPPQ6IPU0 288 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 SLFN12Q8IYM2 578 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 JDP2Q8WYK2 163 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 CDK5RAP3Q96JB5 506 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 SEMA6BQ9H3T3 888 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 PAXBP1Q9Y5B6 917 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 KDM3AQ9Y4C1 1321 aa15.85■□□□□ 0.13
LDB3-207ENST00000542786 IGLV3-22A0A075B6J6 115 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 N4BP3O15049 544 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 CTIFO43310 598 aaKnown RBP15.84■□□□□ 0.13
LDB3-207ENST00000542786 HOXA7P31268 230 aaPredicted RBP15.84■□□□□ 0.13
LDB3-207ENST00000542786 STAT3P40763 770 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 CCDC84Q86UT8 332 aaPredicted RBP15.84■□□□□ 0.13
LDB3-207ENST00000542786 DDX12PQ92771 950 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 TRIM47Q96LD4 638 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 SRRTQ9BXP5 876 aaKnown RBP15.84■□□□□ 0.13
LDB3-207ENST00000542786 DEFB129Q9H1M3 183 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 VPS16Q9H269 839 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 VAV3Q9UKW4 847 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 SPDYE3A6NKU9 549 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 KIF2AO00139 706 aaPredicted RBP15.84■□□□□ 0.13
LDB3-207ENST00000542786 MED24O75448 989 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 ASNSP08243 561 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 PTGER2P43116 358 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 FXR1P51114 621 aaKnown RBP eCLIP15.84■□□□□ 0.13
LDB3-207ENST00000542786 PRR16Q569H4 304 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 FAM160B2Q86V87 743 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 CHURC1Q8WUH1 139 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 TBC1D5Q92609 795 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 SH2D4AQ9H788 454 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 FBXO28Q9NVF7 368 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 CD2APQ9Y5K6 639 aa15.84■□□□□ 0.13
LDB3-207ENST00000542786 BICDL2A1A5D9 508 aa15.83■□□□□ 0.12
LDB3-207ENST00000542786 RNF225M0QZC1 329 aaPredicted RBP15.83■□□□□ 0.12
LDB3-207ENST00000542786 MSH4O15457 936 aa15.83■□□□□ 0.12
LDB3-207ENST00000542786 TRAF1Q13077 416 aa15.83■□□□□ 0.12
LDB3-207ENST00000542786 TRIM65Q6PJ69 517 aa15.83■□□□□ 0.12
LDB3-207ENST00000542786 FOXR2Q6PJQ5 311 aa15.83■□□□□ 0.12
LDB3-207ENST00000542786 GUF1Q8N442 669 aaKnown RBP15.83■□□□□ 0.12
LDB3-207ENST00000542786 FAM20AQ96MK3 541 aa15.83■□□□□ 0.12
LDB3-207ENST00000542786 UIMC1Q96RL1 719 aa15.83■□□□□ 0.12
LDB3-207ENST00000542786 LRRC27Q9C0I9 530 aa15.83■□□□□ 0.12
LDB3-207ENST00000542786 NT5C3AQ9H0P0 336 aa15.83■□□□□ 0.12
LDB3-207ENST00000542786 FEM1BQ9UK73 627 aa15.83■□□□□ 0.12
LDB3-207ENST00000542786 ASTN2O75129 1339 aaPredicted RBP15.83■□□□□ 0.12
LDB3-207ENST00000542786 A0A1W2PQC6 194 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 POTEB3A0JP26 581 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 POTECB2RU33 542 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 FZD9O00144 591 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 FANCGO15287 622 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 SPATA31C1P0DKV0 1188 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 POTEBQ6S5H4 581 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 TOGARAM2Q6ZUX3 1019 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 DYMQ7RTS9 669 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 CSGALNACT2Q8N6G5 542 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 ANKRD20A12PQ8NF67 263 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 CYP2W1Q8TAV3 490 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 TSC1Q92574 1164 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 SLC39A2Q9NP94 309 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 SCAF8Q9UPN6 1271 aaKnown RBP15.82■□□□□ 0.12
LDB3-207ENST00000542786 PPP2R2CQ9Y2T4 447 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 PCDHA2Q9Y5H9 948 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 RBBP6Q7Z6E9 1792 aaKnown RBP15.82■□□□□ 0.12
LDB3-207ENST00000542786 E9PMD0 336 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 CCP110O43303 1012 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 CASP14P31944 242 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 GMPSP49915 693 aaPredicted RBP15.82■□□□□ 0.12
LDB3-207ENST00000542786 RASSF7Q02833 373 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 PPFIBP1Q86W92 1011 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 MB21D1Q8N884 522 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 GLIS3Q8NEA6 775 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 KIFC2Q96AC6 838 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 CCDC51Q96ER9 411 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 WDR18Q9BV38 432 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 KIAA1024Q9UPX6 916 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 ZNF536O15090 1300 aa15.82■□□□□ 0.12
LDB3-207ENST00000542786 FRMD3A2A2Y4 597 aa15.81■□□□□ 0.12
LDB3-207ENST00000542786 NKRFO15226 690 aaKnown RBP eCLIP15.81■□□□□ 0.12
LDB3-207ENST00000542786 MARCH6O60337 910 aa15.81■□□□□ 0.12
LDB3-207ENST00000542786 PLA2G4BP0C869 781 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms