RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 NT5DC1Q5TFE4 455 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 KANK3Q6NY19 840 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 MOXD1Q6UVY6 613 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 CREBRFQ8IUR6 639 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 SPATA20Q8TB22 786 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 MTMR9Q96QG7 549 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 NAP1L4Q99733 375 aaKnown RBP9.98□□□□□ -0.81
DDB1-213ENST00000539332 CCSER1Q9C0I3 900 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 ANO10Q9NW15 660 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 LCTP09848 1927 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 WDR81Q562E7 1941 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 LOXHD1Q8IVV2 1947 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 CYP3A7-CYP3A51PA0A087WV96 503 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 GTPBP6O43824 516 aaPredicted RBP9.97□□□□□ -0.81
DDB1-213ENST00000539332 FOSP01100 380 aaPredicted RBP9.97□□□□□ -0.81
DDB1-213ENST00000539332 CYP3A7P24462 503 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 ZNF157P51786 506 aaPredicted RBP9.97□□□□□ -0.81
DDB1-213ENST00000539332 CBX1P83916 185 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 GHRHRQ02643 423 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 IQCB1Q15051 598 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 GPAT2Q6NUI2 795 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 CPXCR1Q8N123 301 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 CNNM3Q8NE01 707 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 AK8Q96MA6 479 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 AGBL1Q96MI9 1066 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 P2RX7Q99572 595 aaKnown RBP9.97□□□□□ -0.81
DDB1-213ENST00000539332 BPIFA3Q9BQP9 254 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 ANO3Q9BYT9 981 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 CBX8Q9HC52 389 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 CGNQ9P2M7 1197 aaKnown RBP9.97□□□□□ -0.81
DDB1-213ENST00000539332 SERTAD1Q9UHV2 236 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 CCPG1Q9ULG6 757 aa9.97□□□□□ -0.81
DDB1-213ENST00000539332 CCL15-CCL14A0A0B4J2E2 113 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 CCNT1O60563 726 aaKnown RBP9.96□□□□□ -0.81
DDB1-213ENST00000539332 ZBED4O75132 1171 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 SARSP49591 514 aaKnown RBP9.96□□□□□ -0.81
DDB1-213ENST00000539332 USP11P51784 963 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 NLRP12P59046 1061 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 IRX3P78415 501 aaPredicted RBP9.96□□□□□ -0.81
DDB1-213ENST00000539332 FSTL1Q12841 308 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 CCL15Q16663 113 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 PDXDC2PQ6P474 469 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 POTEEQ6S8J3 1075 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 DTHD1Q6ZMT9 781 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 C11orf57Q6ZUT1 292 aaPredicted RBP9.96□□□□□ -0.81
DDB1-213ENST00000539332 IGSF22Q8N9C0 903 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 REPS2Q8NFH8 660 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 BRI3BPQ8WY22 251 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 ASCC2Q9H1I8 757 aaPredicted RBP9.96□□□□□ -0.81
DDB1-213ENST00000539332 DNAJC25Q9H1X3 360 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 TTC12Q9H892 705 aaPredicted RBP9.96□□□□□ -0.81
DDB1-213ENST00000539332 RAVER2Q9HCJ3 691 aaKnown RBP9.96□□□□□ -0.81
DDB1-213ENST00000539332 HOOK1Q9UJC3 728 aaKnown RBP9.96□□□□□ -0.81
DDB1-213ENST00000539332 PNMA2Q9UL42 364 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 ZNF214Q9UL59 606 aaPredicted RBP9.96□□□□□ -0.81
DDB1-213ENST00000539332 CTDP1Q9Y5B0 961 aaPredicted RBP9.96□□□□□ -0.81
DDB1-213ENST00000539332 PAXBP1Q9Y5B6 917 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 TLL2Q9Y6L7 1015 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 ABCB11O95342 1321 aa9.96□□□□□ -0.81
DDB1-213ENST00000539332 KIAA1217Q5T5P2 1943 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 TMEM88BA6NKF7 163 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 SMTNL1A8MU46 457 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 SLC37A4O43826 429 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 TDP2O95551 362 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 SREBF1P36956 1147 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 ZNF165P49910 485 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 FXR2P51116 673 aaKnown RBP eCLIP9.96□□□□□ -0.823e-7■■■□□ 18.4
DDB1-213ENST00000539332 OAZ1P54368 228 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 PABPC4Q13310 644 aaKnown RBP eCLIP9.96□□□□□ -0.82
DDB1-213ENST00000539332 PNOCQ13519 176 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 TMEM132BQ14DG7 1078 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 POSTNQ15063 836 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 RGMBQ6NW40 437 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 USP17L6PQ6QN14 398 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 POTEDQ86YR6 584 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 RASAL3Q86YV0 1011 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 KCNV2Q8TDN2 545 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 ERCC4Q92889 916 aaPredicted RBP9.96□□□□□ -0.82
DDB1-213ENST00000539332 WDR70Q9NW82 654 aa9.96□□□□□ -0.82
DDB1-213ENST00000539332 ATP2A1O14983 1001 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 FOXN1O15353 648 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 CYP3A4P08684 503 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 CIITAP33076 1130 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 HERVK_113P62684 666 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 DPCR1Q3MIW9 517 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 LBX2Q6XYB7 198 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.95□□□□□ -0.82
DDB1-213ENST00000539332 CEP57L1Q8IYX8 460 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 MB21D1Q8N884 522 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 TRIML1Q8N9V2 468 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 IQUBQ8NA54 791 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 TEX13BQ9BXU2 312 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 DISC1Q9NRI5 854 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 ABT1Q9ULW3 272 aaKnown RBP9.95□□□□□ -0.82
DDB1-213ENST00000539332 SLC45A1Q9Y2W3 748 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 MRPL11Q9Y3B7 192 aaKnown RBP9.95□□□□□ -0.82
DDB1-213ENST00000539332 PCDHA5Q9Y5H7 936 aa9.95□□□□□ -0.82
DDB1-213ENST00000539332 CCDC66A2RUB6 948 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 BTBD19C9JJ37 291 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 PDHXO00330 501 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms