RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CD3EP07766 207 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 GSTM1P09488 218 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 AMPD2Q01433 879 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 DDR2Q16832 855 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 EEF1DP3Q658K8 133 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 ANKS3Q6ZW76 656 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 EEPD1Q7L9B9 569 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 BVESQ8NE79 360 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 ADCY4Q8NFM4 1077 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 NLGN2Q8NFZ4 835 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 SH3RF3Q8TEJ3 882 aaPredicted RBP5.47□□□□□ -1.53
USP48-215ENST00000534705 HNRNPLLQ8WVV9 542 aaKnown RBP5.47□□□□□ -1.53
USP48-215ENST00000534705 KISS1RQ969F8 398 aaPredicted RBP5.47□□□□□ -1.53
USP48-215ENST00000534705 SUGT1Q9Y2Z0 365 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 TRBV23OR9-2A0A075B6M9 112 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 B2RBV5 119 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 STK10O94804 968 aaKnown RBP5.46□□□□□ -1.54
USP48-215ENST00000534705 IFNGR1P15260 489 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 RAB33AQ14088 237 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 PPP2R5DQ14738 602 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 SF3A1Q15459 793 aaKnown RBP5.46□□□□□ -1.54
USP48-215ENST00000534705 MRM1Q6IN84 353 aaKnown RBP5.46□□□□□ -1.54
USP48-215ENST00000534705 CRIP3Q6Q6R5 217 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 GLB1LQ6UWU2 654 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 FAM124AQ86V42 546 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 TRIM59Q8IWR1 403 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 LGI4Q8N135 537 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 MRGPRX3Q96LB0 322 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 PTCHD1Q96NR3 888 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 TANGO6Q9C0B7 1094 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 AKT3Q9Y243 479 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 TSC22D4Q9Y3Q8 395 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 BACE2Q9Y5Z0 518 aa5.46□□□□□ -1.54
USP48-215ENST00000534705 NOP56O00567 594 aaKnown RBP5.45□□□□□ -1.54
USP48-215ENST00000534705 SMARCA5O60264 1052 aaPredicted RBP5.45□□□□□ -1.54
USP48-215ENST00000534705 DDAH1O94760 285 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 GJB6O95452 261 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 TBC1D8O95759 1140 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 ATP2B1P20020 1258 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 MC3RP41968 323 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 BORAQ6PGQ7 559 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 ZFPM1Q8IX07 1006 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 CKAP2LQ8IYA6 745 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 ADAMTS17Q8TE56 1095 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 CPA5Q8WXQ8 436 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 ZNF669Q96BR6 464 aaPredicted RBP5.45□□□□□ -1.54
USP48-215ENST00000534705 CDK5RAP1Q96SZ6 601 aaKnown RBP5.45□□□□□ -1.54
USP48-215ENST00000534705 MCMBPQ9BTE3 642 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 SPATA6Q9NWH7 488 aaPredicted RBP5.45□□□□□ -1.54
USP48-215ENST00000534705 PLA2G2DQ9UNK4 145 aa5.45□□□□□ -1.54
USP48-215ENST00000534705 STXBP3O00186 592 aa5.44□□□□□ -1.54
USP48-215ENST00000534705 SLC9A5Q14940 896 aa5.44□□□□□ -1.54
USP48-215ENST00000534705 SPRED1Q7Z699 444 aa5.44□□□□□ -1.54
USP48-215ENST00000534705 CABP7Q86V35 215 aa5.44□□□□□ -1.54
USP48-215ENST00000534705 ZNF227Q86WZ6 799 aa5.44□□□□□ -1.54
USP48-215ENST00000534705 Q8N1X5 172 aa5.44□□□□□ -1.54
USP48-215ENST00000534705 CELF2-AS1Q8N7Q2 184 aa5.44□□□□□ -1.54
USP48-215ENST00000534705 MICAL1Q8TDZ2 1067 aa5.44□□□□□ -1.54
USP48-215ENST00000534705 TSPAN17Q96FV3 270 aa5.44□□□□□ -1.54
USP48-215ENST00000534705 HIRIP3Q9BW71 556 aaPredicted RBP5.44□□□□□ -1.54
USP48-215ENST00000534705 PCDH18Q9HCL0 1135 aa5.44□□□□□ -1.54
USP48-215ENST00000534705 ZNF536O15090 1300 aa5.44□□□□□ -1.54
USP48-215ENST00000534705 C2orf71A6NGG8 1288 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 AGRPO00253 132 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 SCG5P05408 212 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 PMLP29590 882 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 RANGAP1P46060 587 aaPredicted RBP5.43□□□□□ -1.54
USP48-215ENST00000534705 SEPHS1P49903 392 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 SURF1Q15526 300 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 TESK1Q15569 626 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 SLC10A6Q3KNW5 377 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 CRB2Q5IJ48 1285 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 GTF2IRD2BQ6EKJ0 949 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 GTF2IRD2Q86UP8 949 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 ST13P5Q8NFI4 369 aaPredicted RBP5.43□□□□□ -1.54
USP48-215ENST00000534705 SMARCC2Q8TAQ2 1214 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 COPS5Q92905 334 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 CCDC140Q96MF4 163 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 TRIM55Q9BYV6 548 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 NKX2-4Q9H2Z4 354 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 CYP26B1Q9NR63 512 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 NUDT5Q9UKK9 219 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 MSRB2Q9Y3D2 182 aa5.43□□□□□ -1.54
USP48-215ENST00000534705 VAMP4O75379 141 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 KCNH1O95259 989 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 ITGAVP06756 1048 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 L1CAMP32004 1257 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 CACNB2Q08289 660 aaPredicted RBP5.42□□□□□ -1.54
USP48-215ENST00000534705 RGL3Q3MIN7 710 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 SV2CQ496J9 727 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 FAM26FQ5R3K3 315 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 LINC00482Q8N8I6 264 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 ZBTB8AQ96BR9 441 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 SGSM3Q96HU1 749 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 SSBP3Q9BWW4 388 aaPredicted RBP5.42□□□□□ -1.54
USP48-215ENST00000534705 ST6GALNAC2Q9UJ37 374 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 INVSQ9Y283 1065 aa5.42□□□□□ -1.54
USP48-215ENST00000534705 MROH6A6NGR9 719 aa5.41□□□□□ -1.54
USP48-215ENST00000534705 ZBTB7AO95365 584 aa5.41□□□□□ -1.54
USP48-215ENST00000534705 CAPNS1P04632 268 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms