RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 NR1I3Q14994 352 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 ZYXQ15942 572 aaKnown RBP14.99□□□□□ -0.01
BEST1-208ENST00000534553 PRR16Q569H4 304 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 SCYL3Q8IZE3 742 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 NLGN2Q8NFZ4 835 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 NAP1L5Q96NT1 182 aaPredicted RBP14.99□□□□□ -0.01
BEST1-208ENST00000534553 THAP9Q9H5L6 903 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 LIMA1Q9UHB6 759 aaKnown RBP14.99□□□□□ -0.01
BEST1-208ENST00000534553 ZNF541Q9H0D2 1346 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 CCP110O43303 1012 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 CFBP00751 764 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 CCT6AP40227 531 aaKnown RBP14.99□□□□□ -0.01
BEST1-208ENST00000534553 PRELPP51888 382 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 STX17P56962 302 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 CCZ1BP86790 482 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 CCZ1P86791 482 aaPredicted RBP14.99□□□□□ -0.01
BEST1-208ENST00000534553 DNTTIP2Q5QJE6 756 aaKnown RBP14.99□□□□□ -0.01
BEST1-208ENST00000534553 CCDC174Q6PII3 467 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 LDHDQ86WU2 507 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 LRRC15Q8TF66 581 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 LENG9Q96B70 501 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 GDAQ9Y2T3 454 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 PITPNM2Q9BZ72 1349 aa14.98□□□□□ -0.01
BEST1-208ENST00000534553 FAM114A1Q8IWE2 563 aa14.98□□□□□ -0.01
BEST1-208ENST00000534553 GLIS2Q9BZE0 524 aaPredicted RBP14.98□□□□□ -0.01
BEST1-208ENST00000534553 MAF1Q9H063 256 aa14.98□□□□□ -0.01
BEST1-208ENST00000534553 PICK1Q9NRD5 415 aa14.98□□□□□ -0.01
BEST1-208ENST00000534553 ADD3Q9UEY8 706 aaKnown RBP14.98□□□□□ -0.01
BEST1-208ENST00000534553 ITIH6Q6UXX5 1313 aa14.98□□□□□ -0.01
BEST1-208ENST00000534553 MUTP22033 750 aa14.97□□□□□ -0.01
BEST1-208ENST00000534553 CCNE1P24864 410 aa14.97□□□□□ -0.01
BEST1-208ENST00000534553 MCM6Q14566 821 aa14.97□□□□□ -0.01
BEST1-208ENST00000534553 SUPT20HL1Q3ZLR7 823 aa14.97□□□□□ -0.01
BEST1-208ENST00000534553 ANGEL2Q5VTE6 544 aaKnown RBP14.97□□□□□ -0.01
BEST1-208ENST00000534553 APTXQ7Z2E3 356 aaKnown RBP14.97□□□□□ -0.01
BEST1-208ENST00000534553 KRT26Q7Z3Y9 468 aa14.97□□□□□ -0.01
BEST1-208ENST00000534553 P2RX7Q99572 595 aaKnown RBP14.97□□□□□ -0.01
BEST1-208ENST00000534553 INTS13Q9NVM9 706 aa14.97□□□□□ -0.01
BEST1-208ENST00000534553 CCPG1Q9ULG6 757 aa14.97□□□□□ -0.01
BEST1-208ENST00000534553 FAM86B1E9PN63 330 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 KIF20AO95235 890 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 TPM2P07951 284 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 FAM86B2P0C5J1 330 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 RPA1P27694 616 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 HOXA13P31271 388 aaPredicted RBP14.96□□□□□ -0.01
BEST1-208ENST00000534553 HSD17B4P51659 736 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 SPIRE1Q08AE8 756 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 TBX2Q13207 712 aaPredicted RBP14.96□□□□□ -0.01
BEST1-208ENST00000534553 TRIM14Q14142 442 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 DOCK1Q14185 1865 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 TCP11X2Q5H9J9 407 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 NBPF12Q5TAG4 269 aaPredicted RBP14.96□□□□□ -0.01
BEST1-208ENST00000534553 ARMCX5Q6P1M9 558 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 FCHSD1Q86WN1 690 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 GUF1Q8N442 669 aaKnown RBP14.96□□□□□ -0.01
BEST1-208ENST00000534553 P2RX5Q93086 422 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 C12orf42Q96LP6 360 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 PRIMPOLQ96LW4 560 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 SLC38A10Q9HBR0 1119 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 MAGEC2Q9UBF1 373 aaPredicted RBP14.96□□□□□ -0.01
BEST1-208ENST00000534553 PPP1R9AQ9ULJ8 1098 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 DICER1Q9UPY3 1922 aaKnown RBP14.96□□□□□ -0.01
BEST1-208ENST00000534553 IGLV3-22A0A075B6J6 115 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 MYMKA6NI61 221 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 C19orf81C9J6K1 198 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 FGFR1OPO95684 399 aaKnown RBP14.96□□□□□ -0.01
BEST1-208ENST00000534553 TUBB4AP04350 444 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 TPM1P09493 284 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 BACE1P56817 501 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 ARHGAP27Q6ZUM4 889 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 ZNF280CQ8ND82 737 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 DDX12PQ92771 950 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 TRIM47Q96LD4 638 aa14.96□□□□□ -0.01
BEST1-208ENST00000534553 CTDP1Q9Y5B0 961 aaPredicted RBP14.96□□□□□ -0.01
BEST1-208ENST00000534553 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.96□□□□□ -0.01
BEST1-208ENST00000534553 KCNJ18B7U540 433 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 KIF2AO00139 706 aaPredicted RBP14.95□□□□□ -0.02
BEST1-208ENST00000534553 MSH4O15457 936 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 ZBED4O75132 1171 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 VCAM1P19320 739 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 INPP5BP32019 993 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 LRRC63Q05C16 580 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 KCNJ12Q14500 433 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 CEP55Q53EZ4 464 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 HSP90AA4PQ58FG1 418 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 NOL9Q5SY16 702 aaKnown RBP14.95□□□□□ -0.02
BEST1-208ENST00000534553 TTI2Q6NXR4 508 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 CCDC65Q8IXS2 484 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 WRNIP1Q96S55 665 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 POLR3CQ9BUI4 534 aaPredicted RBP14.95□□□□□ -0.02
BEST1-208ENST00000534553 WDR11Q9BZH6 1224 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 TANGO6Q9C0B7 1094 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 TMX1Q9H3N1 280 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 FBXO28Q9NVF7 368 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.95□□□□□ -0.02
BEST1-208ENST00000534553 KIAA1024Q9UPX6 916 aa14.95□□□□□ -0.02
BEST1-208ENST00000534553 FLOT1O75955 427 aa14.94□□□□□ -0.02
BEST1-208ENST00000534553 BCRP11274 1271 aa14.94□□□□□ -0.02
BEST1-208ENST00000534553 OAZ1P54368 228 aa14.94□□□□□ -0.02
BEST1-208ENST00000534553 EHHADHQ08426 723 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms