RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 CYP26B1Q9NR63 512 aa8.09□□□□□ -1.11
SSR3-207ENST00000478842 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.09□□□□□ -1.11
SSR3-207ENST00000478842 PPLO60437 1756 aa8.08□□□□□ -1.12
SSR3-207ENST00000478842 PRODHO43272 600 aa8.08□□□□□ -1.12
SSR3-207ENST00000478842 CPP00450 1065 aa8.08□□□□□ -1.12
SSR3-207ENST00000478842 PABPC1P11940 636 aaKnown RBP8.08□□□□□ -1.12
SSR3-207ENST00000478842 ENDOUP21128 410 aaKnown RBP8.08□□□□□ -1.12
SSR3-207ENST00000478842 BMP8BP34820 402 aa8.08□□□□□ -1.12
SSR3-207ENST00000478842 TMPRSS7Q7RTY8 843 aa8.08□□□□□ -1.12
SSR3-207ENST00000478842 BTN2A2Q8WVV5 523 aa8.08□□□□□ -1.12
SSR3-207ENST00000478842 PLAAQ9Y263 795 aa8.08□□□□□ -1.12
SSR3-207ENST00000478842 MRPS23Q9Y3D9 190 aaKnown RBP8.08□□□□□ -1.12
SSR3-207ENST00000478842 PRKAB1Q9Y478 270 aa8.08□□□□□ -1.12
SSR3-207ENST00000478842 CCDC144AA2RUR9 1427 aa8.08□□□□□ -1.12
SSR3-207ENST00000478842 DISP2A7MBM2 1401 aa8.08□□□□□ -1.12
SSR3-207ENST00000478842 FMN2Q9NZ56 1722 aa8.07□□□□□ -1.12
SSR3-207ENST00000478842 H0Y8X5 98 aa8.07□□□□□ -1.12
SSR3-207ENST00000478842 MEIS1O00470 390 aa8.07□□□□□ -1.12
SSR3-207ENST00000478842 ASMTLO95671 621 aa8.07□□□□□ -1.12
SSR3-207ENST00000478842 PCBP3P57721 371 aaKnown RBP8.07□□□□□ -1.12
SSR3-207ENST00000478842 RNF187Q5TA31 235 aaPredicted RBP8.07□□□□□ -1.12
SSR3-207ENST00000478842 LINC00116Q8NCU8 138 aa8.07□□□□□ -1.12
SSR3-207ENST00000478842 KCTD13Q8WZ19 329 aa8.07□□□□□ -1.12
SSR3-207ENST00000478842 KISS1RQ969F8 398 aaPredicted RBP8.07□□□□□ -1.12
SSR3-207ENST00000478842 TCTN2Q96GX1 697 aa8.07□□□□□ -1.12
SSR3-207ENST00000478842 HSPA12BQ96MM6 686 aa8.07□□□□□ -1.12
SSR3-207ENST00000478842 IER2Q9BTL4 223 aa8.07□□□□□ -1.12
SSR3-207ENST00000478842 RNF112Q9ULX5 631 aa8.07□□□□□ -1.12
SSR3-207ENST00000478842 TECPR2O15040 1411 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 NAIPQ13075 1403 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 H3BS24 57 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 PPP1R12AO14974 1030 aaPredicted RBP8.06□□□□□ -1.12
SSR3-207ENST00000478842 TBX1O43435 398 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 SCG5P05408 212 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 YY1P25490 414 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 TPP2P29144 1249 aaPredicted RBP8.06□□□□□ -1.12
SSR3-207ENST00000478842 GRIA2P42262 883 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 CTSKP43235 329 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 MAP4K2Q12851 820 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 FAM209AQ5JX71 171 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 YOD1Q5VVQ6 348 aaPredicted RBP8.06□□□□□ -1.12
SSR3-207ENST00000478842 CRTC3Q6UUV7 619 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 KRT28Q7Z3Y7 464 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 UBE2FQ969M7 185 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 OSBP2Q969R2 916 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 EXOC2Q96KP1 924 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 LGR4Q9BXB1 951 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 PLAGL2Q9UPG8 496 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 ABCA3Q99758 1704 aa8.06□□□□□ -1.12
SSR3-207ENST00000478842 TNS1Q9HBL0 1735 aaKnown RBP8.06□□□□□ -1.12
SSR3-207ENST00000478842 SSU72P8A0A1W2PR75 194 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 PRR19A6NJB7 356 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 VAMP4O75379 141 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 SNRPB2P08579 225 aaKnown RBP8.05□□□□□ -1.12
SSR3-207ENST00000478842 L1CAMP32004 1257 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 GFRA1P56159 465 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 R3HDM1Q15032 1099 aaKnown RBP8.05□□□□□ -1.12
SSR3-207ENST00000478842 GAB4Q2WGN9 574 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 FOXB2Q5VYV0 432 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 RNF111Q6ZNA4 994 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 ZNF662Q6ZS27 426 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 PLD6Q8N2A8 252 aaKnown RBP8.05□□□□□ -1.12
SSR3-207ENST00000478842 ASB11Q8WXH4 323 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 MISP3Q96FF7 219 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 MRPL4Q9BYD3 311 aaKnown RBP8.05□□□□□ -1.12
SSR3-207ENST00000478842 SEMA3GQ9NS98 782 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 ZSWIM5Q9P217 1185 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 ZC3H7BQ9UGR2 993 aaKnown RBP8.05□□□□□ -1.12
SSR3-207ENST00000478842 GPR55Q9Y2T6 319 aaPredicted RBP8.05□□□□□ -1.12
SSR3-207ENST00000478842 U3KQE9 123 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 KNDC1Q76NI1 1749 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 NRAPQ86VF7 1730 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 SBNO1A3KN83 1393 aa8.05□□□□□ -1.12
SSR3-207ENST00000478842 TNS3Q68CZ2 1445 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 FAM83GA6ND36 823 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 PLD2O14939 933 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 RFPL3O75679 317 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 CD3EP07766 207 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 VAV1P15498 845 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 GRIK1P39086 918 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 KCNJ6P48051 423 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 GYS2P54840 703 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 FNDC3BQ53EP0 1204 aaKnown RBP8.04□□□□□ -1.12
SSR3-207ENST00000478842 HRASLS5Q96KN8 279 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 NCOA5Q9HCD5 579 aaKnown RBP8.04□□□□□ -1.12
SSR3-207ENST00000478842 DUSP13Q9UII6 198 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 TCFL5Q9UL49 500 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 MINPP1Q9UNW1 487 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 BACE2Q9Y5Z0 518 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 ARHGEF10O15013 1369 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 PARD3Q8TEW0 1356 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 ABCC11Q96J66 1382 aa8.04□□□□□ -1.12
SSR3-207ENST00000478842 RGPD8O14715 1765 aaPredicted RBP8.04□□□□□ -1.12
SSR3-207ENST00000478842 PITPNM2Q9BZ72 1349 aa8.03□□□□□ -1.12
SSR3-207ENST00000478842 COL14A1Q05707 1796 aaKnown RBP8.03□□□□□ -1.12
SSR3-207ENST00000478842 ADGRB2O60241 1585 aa8.03□□□□□ -1.12
SSR3-207ENST00000478842 C2orf71A6NGG8 1288 aa8.03□□□□□ -1.12
SSR3-207ENST00000478842 AURKAO14965 403 aa8.03□□□□□ -1.12
SSR3-207ENST00000478842 DLX3O60479 287 aa8.03□□□□□ -1.12
SSR3-207ENST00000478842 ZNF205O95201 554 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms