RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 C17orf99Q6UX52 265 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 TMTC2Q8N394 836 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 FERMT2Q96AC1 680 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 KRT23Q9C075 422 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 FAM198AQ9UFP1 575 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 MYO5AQ9Y4I1 1855 aaKnown RBP10.7□□□□□ -0.7
HDAC3-205ENST00000469550 PTPRFP10586 1907 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 KIAA0100Q14667 2235 aaKnown RBP10.7□□□□□ -0.7
HDAC3-205ENST00000469550 MGAMO43451 1857 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 PHIPQ8WWQ0 1821 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 IFIT3O14879 490 aaKnown RBP10.7□□□□□ -0.7
HDAC3-205ENST00000469550 PHACTR2O75167 634 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 PRDX5P30044 214 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 INPP5BP32019 993 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 KIF22Q14807 665 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 PPP2R5BQ15173 497 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 KRT31Q15323 416 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 TADA2BQ86TJ2 420 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 CRACR2BQ8N4Y2 399 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-205ENST00000469550 EHBP1Q8NDI1 1231 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 ANKRD20A12PQ8NF67 263 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 RUBCNQ92622 972 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 STRBPQ96SI9 672 aaKnown RBP10.7□□□□□ -0.7
HDAC3-205ENST00000469550 PYM1Q9BRP8 204 aaKnown RBP10.7□□□□□ -0.7
HDAC3-205ENST00000469550 TMEM106CQ9BVX2 250 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 IDI2Q9BXS1 227 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 RWDD2AQ9UIY3 292 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 EPN1Q9Y6I3 576 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-205ENST00000469550 TRIM75PA6NK02 468 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 PATL2C9JE40 543 aaKnown RBP10.69□□□□□ -0.7
HDAC3-205ENST00000469550 N4BP3O15049 544 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 ENTPD3O75355 529 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 NDUFA10O95299 355 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 ABL1P00519 1130 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 APPP05067 770 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 GUCY1A2P33402 732 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 MCAMP43121 646 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 COPB1P53618 953 aaKnown RBP10.69□□□□□ -0.7
HDAC3-205ENST00000469550 STX17P56962 302 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 MAP3K10Q02779 954 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 NFIAQ12857 509 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 STIM1Q13586 685 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 MOGSQ13724 837 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 DIXDC1Q155Q3 683 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 RTN1Q16799 776 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 SLC9C1Q4G0N8 1177 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 MMS22LQ6ZRQ5 1243 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 USP49Q70CQ1 688 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 DEF6Q9H4E7 631 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 ZSWIM5Q9P217 1185 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 KCNJ14Q9UNX9 436 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 SAR1BQ9Y6B6 198 aa10.69□□□□□ -0.7
HDAC3-205ENST00000469550 A6NNZ2 444 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 CXCL11O14625 94 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 EN2P19622 333 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-205ENST00000469550 KRT9P35527 623 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 PHKA1P46020 1223 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 TUBB8Q3ZCM7 444 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 NCAPH2Q6IBW4 605 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 KLHL10Q6JEL2 608 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 GBP6Q6ZN66 633 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 MIGA2Q7L4E1 593 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 FAM163AQ96GL9 167 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-205ENST00000469550 CEP89Q96ST8 783 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 NUP88Q99567 741 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-205ENST00000469550 MYL10Q9BUA6 226 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 REXO2Q9Y3B8 237 aaKnown RBP10.68□□□□□ -0.7
HDAC3-205ENST00000469550 COL2A1P02458 1487 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-205ENST00000469550 A0A087X0B3 334 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 A0A1W2PQC6 194 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 TCRBV5S4A2TA0A5A2 114 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 ANO9A1A5B4 782 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 TFRCP02786 760 aaKnown RBP10.68□□□□□ -0.7
HDAC3-205ENST00000469550 NR5A1Q13285 461 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 SART3Q15020 963 aaKnown RBP10.68□□□□□ -0.7
HDAC3-205ENST00000469550 TCP11X2Q5H9J9 407 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 AKNAD1Q5T1N1 836 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 CCNI2Q6ZMN8 369 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-205ENST00000469550 OR8K1Q8NGG5 319 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 NCAPGQ9BPX3 1015 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 SLF1Q9BQI6 1058 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 RNF26Q9BY78 433 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-205ENST00000469550 ARHGAP39Q9C0H5 1083 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 USP40Q9NVE5 1235 aa10.68□□□□□ -0.7
HDAC3-205ENST00000469550 ZNF532Q9HCE3 1301 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 PHF20L1A8MW92 1017 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 RNF225M0QZC1 329 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-205ENST00000469550 NPM3O75607 178 aaKnown RBP10.67□□□□□ -0.7
HDAC3-205ENST00000469550 PDE6AP16499 860 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 XBP1P17861 261 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 AFMP43652 599 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 KRT83P78385 493 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 AKAP17AQ02040 695 aaKnown RBP10.67□□□□□ -0.7
HDAC3-205ENST00000469550 ITIH3Q06033 890 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 IQCEQ6IPM2 695 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 PI16Q6UXB8 463 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 SLF2Q8IX21 1173 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 FAM76AQ8TAV0 307 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 MMS19Q96T76 1030 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 DNAJC7Q99615 494 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms