RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 CNNM4Q6P4Q7 775 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 CCDC174Q6PII3 467 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 UNC13DQ70J99 1090 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 BAG1Q99933 345 aaPredicted RBP11.38□□□□□ -0.59
MSH5-211ENST00000463144 SRRTQ9BXP5 876 aaKnown RBP11.38□□□□□ -0.59
MSH5-211ENST00000463144 SLC39A2Q9NP94 309 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 FBXO28Q9NVF7 368 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 PVALEFA0A1B0GWK0 134 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 PIK3CDO00329 1044 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 N4BP3O15049 544 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 RASSF7Q02833 373 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 SPAG1Q07617 926 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 STIM1Q13586 685 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 COBLL1Q53SF7 1204 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 PRR16Q569H4 304 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 REXO1L1PQ8IX06 675 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 CYP2W1Q8TAV3 490 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 TSC1Q92574 1164 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 DDX12PQ92771 950 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 P2RX5Q93086 422 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 KIFC2Q96AC6 838 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 THAP9Q9H5L6 903 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 BCS1LQ9Y276 419 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 SPDYE3A6NKU9 549 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 AKR1B15C9JRZ8 316 aaPredicted RBP11.37□□□□□ -0.59
MSH5-211ENST00000463144 E9PMD0 336 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 NRDCO43847 1150 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 PLA2G6O60733 806 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 MED24O75448 989 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 CIITAP33076 1130 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 EHHADHQ08426 723 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 SAMD7Q7Z3H4 446 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 CREBRFQ8IUR6 639 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 CHURC1Q8WUH1 139 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 CPLX3Q8WVH0 158 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 CCDC47Q96A33 483 aaKnown RBP11.37□□□□□ -0.59
MSH5-211ENST00000463144 DNAJC19Q96DA6 116 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 EEF2KMTQ96G04 330 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 SEMA6BQ9H3T3 888 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 ITIH6Q6UXX5 1313 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 POTEB3A0JP26 581 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 POTECB2RU33 542 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 RNF225M0QZC1 329 aaPredicted RBP11.37□□□□□ -0.59
MSH5-211ENST00000463144 ARHGAP6O43182 974 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 STX10O60499 249 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 GYPCP04921 128 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 ASNSP08243 561 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 INPP5BP32019 993 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 GMPSP49915 693 aaPredicted RBP11.37□□□□□ -0.59
MSH5-211ENST00000463144 FXR1P51114 621 aaKnown RBP eCLIP11.37□□□□□ -0.59
MSH5-211ENST00000463144 POTEBQ6S5H4 581 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 KIAA1024Q9UPX6 916 aa11.37□□□□□ -0.59
MSH5-211ENST00000463144 DYNC1I1O14576 645 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 TBX3O15119 743 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 NKRFO15226 690 aaKnown RBP eCLIP11.36□□□□□ -0.59
MSH5-211ENST00000463144 MSH4O15457 936 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 CYP3A4P08684 503 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 RPS12P25398 132 aaKnown RBP11.36□□□□□ -0.59
MSH5-211ENST00000463144 CASP14P31944 242 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 CENPPQ6IPU0 288 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 FCHSD1Q86WN1 690 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 MICALL2Q8IY33 904 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 SLFN12Q8IYM2 578 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 GLIS3Q8NEA6 775 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 ZNF507Q8TCN5 953 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 ZNF592Q92610 1267 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 PANX2Q96RD6 677 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 UTRNP46939 3433 aa11.36□□□□□ -0.59
MSH5-211ENST00000463144 IGLV3-22A0A075B6J6 115 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 FZD9O00144 591 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 CFBP00751 764 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 EEF1GP26641 437 aaKnown RBP11.35□□□□□ -0.59
MSH5-211ENST00000463144 PTGER2P43116 358 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 DGKZQ13574 1117 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 TBC1D10BQ4KMP7 808 aaPredicted RBP11.35□□□□□ -0.59
MSH5-211ENST00000463144 SAMD1Q6SPF0 538 aaPredicted RBP11.35□□□□□ -0.59
MSH5-211ENST00000463144 TOGARAM2Q6ZUX3 1019 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 FAM160B2Q86V87 743 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 CSGALNACT2Q8N6G5 542 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 ZNF341Q9BYN7 854 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 GTPBP4Q9BZE4 634 aaKnown RBP11.35□□□□□ -0.59
MSH5-211ENST00000463144 NT5C3AQ9H0P0 336 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 SH2D4AQ9H788 454 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 CNOT7Q9UIV1 285 aaKnown RBP11.35□□□□□ -0.59
MSH5-211ENST00000463144 FEM1BQ9UK73 627 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 PAXBP1Q9Y5B6 917 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 CD2APQ9Y5K6 639 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 KDM3AQ9Y4C1 1321 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 MFAP3LO75121 409 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 PLA2G4BP0C869 781 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 SPATA31C1P0DKV0 1188 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 IDEP14735 1019 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 UBXN1Q04323 297 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 MTF1Q14872 753 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 CATSPER3Q86XQ3 398 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 ANKRD20A12PQ8NF67 263 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 NOC3LQ8WTT2 800 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 380 ms