RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 PTPRMP28827 1452 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 B4DLN1 442 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 WDR46O15213 610 aaKnown RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 ARHGEF9O43307 516 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 THAP12O43422 761 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 ATP6V1G1O75348 118 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 COPS2P61201 443 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 TBL3Q12788 808 aaKnown RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 LGSNQ5TDP6 509 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 RBM12BQ8IXT5 1001 aaKnown RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 CCDC82Q8N4S0 544 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 SYT2Q8N9I0 419 aaPredicted RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 ICA1LQ8NDH6 482 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 ZNF274Q96GC6 653 aaPredicted RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 LSG1Q9H089 658 aaKnown RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 CNNM2Q9H8M5 875 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 PASKQ96RG2 1323 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 TMEM94Q12767 1356 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 P4HA2O15460 535 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 EEF1GP26641 437 aaKnown RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 SEC24CP53992 1094 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 SKOR1P84550 965 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 CCDC15Q0P6D6 951 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 ZCWPW2Q504Y3 356 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 ZNF530Q6P9A1 599 aaPredicted RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 STXBP4Q6ZWJ1 553 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 RRAGAQ7L523 313 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 GRK7Q8WTQ7 553 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 CCDC138Q96M89 665 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 TTC1Q99614 292 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 MTRQ99707 1265 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 FUCA2Q9BTY2 467 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 SLAIN2Q9P270 581 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 STAP2Q9UGK3 403 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 ZFP69BQ9UJL9 534 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 LRCH1Q9Y2L9 728 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 PLEKHG1Q9ULL1 1385 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 BUB1O43683 1085 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 EIF2S1P05198 315 aaKnown RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 HAND2P61296 217 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 BYSLQ13895 437 aaKnown RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 R3HDM1Q15032 1099 aaKnown RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 GSDMAQ96QA5 445 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 SUGCTQ9HAC7 445 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 ATP11BQ9Y2G3 1177 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 SH3GLB1Q9Y371 365 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 KIF1BO60333 1816 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 FER1L4A9Z1Z3 1794 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 TMEM110-MUSTN1A8MSY1 372 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 CCDC159P0C7I6 412 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 HSPA6P17066 643 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 SERPINB8P50452 374 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 SLC39A14Q15043 492 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 ADRM1Q16186 407 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 CATSPER1Q8NEC5 780 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 DDHD1Q8NEL9 900 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 THAP11Q96EK4 314 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 LRGUKQ96M69 825 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 GPR101Q96P66 508 aaPredicted RBP5.59□□□□□ -1.52
SCN11A-202ENST00000444237 CYTH2Q99418 400 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 EHD2Q9NZN4 543 aa5.59□□□□□ -1.52
SCN11A-202ENST00000444237 CAMSAP1Q5T5Y3 1602 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 MCF2P10911 925 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 ADARP55265 1226 aaKnown RBP5.58□□□□□ -1.52
SCN11A-202ENST00000444237 MTA1Q13330 715 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 ZNF554Q86TJ5 538 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 CROCCP3Q8IVE0 287 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 LINC00301Q8NCQ3 95 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 PGBD1Q96JS3 809 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 ANLNQ9NQW6 1124 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 DDX20Q9UHI6 824 aaKnown RBP5.58□□□□□ -1.52
SCN11A-202ENST00000444237 LZTS1Q9Y250 596 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 R3HDM2Q9Y2K5 976 aaKnown RBP5.58□□□□□ -1.52
SCN11A-202ENST00000444237 COMMD3-BMI1R4GMX3 469 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 KDRP35968 1356 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 SPOPO43791 374 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 HAUS5O94927 633 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 CACNA2D1P54289 1103 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 ZBED6P86452 979 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 EHHADHQ08426 723 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 WTAPQ15007 396 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 PSMD6Q15008 389 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 CC2D2BQ6DHV5 1058 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 RASGRP2Q7LDG7 609 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 RASSF3Q86WH2 238 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 CTAGE3PQ8IX95 158 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 TSPYL6Q8N831 410 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 ORAI2Q96SN7 254 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 ABHD10Q9NUJ1 306 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 USP40Q9NVE5 1235 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 DBNLQ9UJU6 430 aaKnown RBP5.58□□□□□ -1.52
SCN11A-202ENST00000444237 A2ML1A8K2U0 1454 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 TET3O43151 1660 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 TRPM2O94759 1503 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 GNAT3A8MTJ3 354 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 LSM1O15116 133 aaKnown RBP5.58□□□□□ -1.52
SCN11A-202ENST00000444237 STK10O94804 968 aaKnown RBP5.58□□□□□ -1.52
SCN11A-202ENST00000444237 KRT8P05787 483 aa5.58□□□□□ -1.52
SCN11A-202ENST00000444237 KRT5P13647 590 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms