RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 GNAT2P19087 354 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 PLCG1P19174 1290 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 TNFRSF8P28908 595 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 TNNC1P63316 161 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 DRP2Q13474 957 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 KCNB1Q14721 858 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 PUM3Q15397 648 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 DYMQ7RTS9 669 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 ERGIC2Q96RQ1 377 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 PAGR1Q9BTK6 254 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 KANSL2Q9H9L4 492 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 RBM28Q9NW13 759 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 KCNG1Q9UIX4 513 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 MEGF6O75095 1541 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 TLDC2A0PJX2 215 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 EIF4E1BA6NMX2 242 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 TMCO5BA8MYB1 307 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 SLC5A1P13866 664 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 KLRC1P26715 233 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 TROAPQ12815 778 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 KIAA0753Q2KHM9 967 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 FAM133BQ5BKY9 247 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 TMTC3Q6ZXV5 915 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 STAMBPL1Q96FJ0 436 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 TAF1DQ9H5J8 278 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 NOD2Q9HC29 1040 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 ARFGEF2Q9Y6D5 1785 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 CTSWP56202 376 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 ERVK-9P63128 1117 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 PPP2R2AP63151 447 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 CDK17Q00537 523 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 CD302Q8IX05 232 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 BLIDQ8IZY5 108 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 TBC1D5Q92609 795 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 GGT7Q9UJ14 662 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 FBXL5Q9UKA1 691 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 ECM29Q5VYK3 1845 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 FAM205AQ6ZU69 1335 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 A0A1W2PQJ5 194 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 FLT3P36888 993 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 EVX2Q03828 476 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 ZNF844Q08AG5 666 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 PPP2R5BQ15173 497 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 RUFY4Q6ZNE9 571 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 LRRC15Q8TF66 581 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 NSMCE1Q8WV22 266 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 SPDL1Q96EA4 605 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 DPH5Q9H2P9 285 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 TCP11L1Q9NUJ3 509 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 ADAMTS1Q9UHI8 967 aa12.71□□□□□ -0.37
HMGCS1-202ENST00000433297 SPEF2Q9C093 1822 aa12.71□□□□□ -0.38
HMGCS1-202ENST00000433297 MRPL12P52815 198 aaKnown RBP12.71□□□□□ -0.38
HMGCS1-202ENST00000433297 ADGRA1Q86SQ6 560 aa12.71□□□□□ -0.38
HMGCS1-202ENST00000433297 CABP7Q86V35 215 aa12.71□□□□□ -0.38
HMGCS1-202ENST00000433297 SELENOSQ9BQE4 189 aa12.71□□□□□ -0.38
HMGCS1-202ENST00000433297 PACSIN1Q9BY11 444 aa12.71□□□□□ -0.38
HMGCS1-202ENST00000433297 DDX47Q9H0S4 455 aaKnown RBP12.71□□□□□ -0.38
HMGCS1-202ENST00000433297 SEMA6BQ9H3T3 888 aa12.71□□□□□ -0.38
HMGCS1-202ENST00000433297 GOPCQ9HD26 462 aa12.71□□□□□ -0.38
HMGCS1-202ENST00000433297 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.71□□□□□ -0.38
HMGCS1-202ENST00000433297 CTNND1O60716 968 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 BIRC2Q13490 618 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 LRRC41Q15345 812 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 SLC9C1Q4G0N8 1177 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 ARL6IP4Q66PJ3 421 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 VGLL2Q8N8G2 317 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 TSKSQ9UJT2 592 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 BCL9LQ86UU0 1499 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 MAGEB6P1A0A0J9YX57 407 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 ATP6V1G2O95670 118 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 TRAPPC10P48553 1259 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 CCNHP51946 323 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 DYNLL1P63167 89 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 LRRC45Q96CN5 670 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 ZNF512BQ96KM6 892 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 TRIM9Q9C026 710 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 HSPA9P38646 679 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 TECP42680 631 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 POLR2FP61218 127 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 ELF3P78545 371 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 RAPGEF1Q13905 1077 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 UAP1Q16222 522 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 CCDC84Q86UT8 332 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 MREGQ8N565 214 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 C4orf32Q8N8J7 132 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 CCDC63Q8NA47 563 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 NEUROG2Q9H2A3 272 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 PLCB1Q9NQ66 1216 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 KBTBD4Q9NVX7 518 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.7□□□□□ -0.385e-16■□□□□ 10.9
HMGCS1-202ENST00000433297 SLC12A6Q9UHW9 1150 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 SIK3Q9Y2K2 1263 aa12.7□□□□□ -0.38
HMGCS1-202ENST00000433297 ATRNO75882 1429 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 TMEM94Q12767 1356 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 HGSO14964 777 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 DAPK3O43293 454 aa12.69□□□□□ -0.38
HMGCS1-202ENST00000433297 RPS6KA1Q15418 735 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms