RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TNFAIP1Q13829 316 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 FKBP15Q5T1M5 1219 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 PPP4R3CPQ6ZMV5 832 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CCDC84Q86UT8 332 aaPredicted RBP16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 IRF2BP1Q8IU81 584 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 MB21D1Q8N884 522 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ZNF507Q8TCN5 953 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 NUP88Q99567 741 aaPredicted RBP16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 PSMD14O00487 310 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 GDF11O95390 407 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 GNA14O95837 355 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ASNSP08243 561 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TRIM65Q6PJ69 517 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 SYT10Q6XYQ8 523 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CCDC65Q8IXS2 484 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 LRRC15Q8TF66 581 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ERGIC2Q96RQ1 377 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 DNAJC7Q99615 494 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TUBGCP2Q9BSJ2 902 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ZNHIT6Q9NWK9 470 aaKnown RBP16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TAB2Q9NYJ8 693 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ZBTB21Q9ULJ3 1066 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 MYMKA6NI61 221 aa16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 RPS12P25398 132 aaKnown RBP16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 STK4Q13043 487 aa16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ZNF662Q6ZS27 426 aa16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 SAMD3Q8N6K7 520 aa16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 KIAA0895Q8NCT3 520 aa16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 OR8K1Q8NGG5 319 aa16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ETNPPLQ8TBG4 499 aa16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CNOT6LQ96LI5 555 aaKnown RBP16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 DEFB129Q9H1M3 183 aa16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 VPS16Q9H269 839 aa16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CAPN11Q9UMQ6 739 aa16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 LUC7L2Q9Y383 392 aaKnown RBP16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ADGRG1Q9Y653 693 aa16.21■□□□□ 0.19
HLA-DPA1-242ENST00000419277 RBBP6Q7Z6E9 1792 aaKnown RBP16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 CNTNAP1P78357 1384 aa16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 FAM196BA6NMK8 535 aa16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 KIF5CO60282 957 aa16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 CDK17Q00537 523 aa16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 NCBP1Q09161 790 aaKnown RBP16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 ZNF397Q8NF99 534 aaPredicted RBP16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 DDX12PQ92771 950 aa16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 DUSP9Q99956 384 aaKnown RBP16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 RANBP17Q9H2T7 1088 aaKnown RBP16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 VCPKMTQ9H867 229 aa16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 PRR12Q9ULL5 1215 aa16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 PCDHAC2Q9Y5I4 1007 aa16.2■□□□□ 0.18
HLA-DPA1-242ENST00000419277 FRMD3A2A2Y4 597 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 TRIM49BA6NDI0 452 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 USP17L15C9J2P7 530 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 USP17L13C9JLJ4 530 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 USP17L11C9JVI0 530 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 USP17L18D6R9N7 530 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 USP17L22D6RA61 530 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 USP17L17D6RBQ6 530 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 USP17L19D6RCP7 530 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 USP17L20D6RJB6 530 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 RAD21O60216 631 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 RPA1P27694 616 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 KRT9P35527 623 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 SETQ01105 290 aaPredicted RBP16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 USP17L24Q0WX57 530 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 MCM6Q14566 821 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 USP17L6PQ6QN14 398 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 MYOCDQ8IZQ8 938 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 EHBP1Q8NDI1 1231 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 ZBED3Q96IU2 234 aaPredicted RBP16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 CEP63Q96MT8 703 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 PLIN2Q99541 437 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 EDEM3Q9BZQ6 932 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 FEM1BQ9UK73 627 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 MAPK8IP1Q9UQF2 711 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 MRPL11Q9Y3B7 192 aaKnown RBP16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 CASQ1P31415 396 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 MTIF2P46199 727 aaKnown RBP16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 FXR1P51114 621 aaKnown RBP eCLIP16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 PMS1P54277 932 aaKnown RBP16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 MEA1Q16626 185 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 MAN2A1Q16706 1144 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 FAM26FQ5R3K3 315 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 CCDC170Q8IYT3 715 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 LPAR1Q92633 364 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 PIM2Q9P1W9 311 aa16.19■□□□□ 0.18
HLA-DPA1-242ENST00000419277 IPO7O95373 1038 aaKnown RBP16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 TRIM21P19474 475 aaKnown RBP16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 KCNA3P22001 575 aa16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 ZBED6P86452 979 aa16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 TNIP1Q15025 636 aa16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 ANKRD40Q6AI12 368 aa16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 TOGARAM2Q6ZUX3 1019 aa16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 TXLNBQ8N3L3 684 aa16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 DNAJC19Q96DA6 116 aa16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 POLR3CQ9BUI4 534 aaPredicted RBP16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 NOC4LQ9BVI4 516 aaKnown RBP16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 MAP3K20Q9NYL2 800 aaKnown RBP16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 RGS17Q9UGC6 210 aaPredicted RBP16.18■□□□□ 0.18
HLA-DPA1-242ENST00000419277 ZNF215Q9UL58 517 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms