RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 GSTCDQ8NEC7 633 aa7.24□□□□□ -1.25
NOD1-203ENST00000413433 PI4K2BQ8TCG2 481 aa7.24□□□□□ -1.25
NOD1-203ENST00000413433 DCAF11Q8TEB1 546 aa7.24□□□□□ -1.25
NOD1-203ENST00000413433 PTPRN2Q92932 1015 aa7.24□□□□□ -1.25
NOD1-203ENST00000413433 MAGEB10Q96LZ2 347 aaPredicted RBP7.24□□□□□ -1.25
NOD1-203ENST00000413433 CCDC8Q9H0W5 538 aaPredicted RBP7.24□□□□□ -1.25
NOD1-203ENST00000413433 ARNT2Q9HBZ2 717 aa7.24□□□□□ -1.25
NOD1-203ENST00000413433 ZNF180Q9UJW8 692 aa7.24□□□□□ -1.25
NOD1-203ENST00000413433 TRHDEQ9UKU6 1024 aa7.24□□□□□ -1.25
NOD1-203ENST00000413433 APOBEC2Q9Y235 224 aaKnown RBP7.24□□□□□ -1.25
NOD1-203ENST00000413433 TECPR2O15040 1411 aa7.24□□□□□ -1.25
NOD1-203ENST00000413433 CDC42BPGQ6DT37 1551 aa7.24□□□□□ -1.25
NOD1-203ENST00000413433 PPLO60437 1756 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 HYAL3O43820 417 aaPredicted RBP7.23□□□□□ -1.25
NOD1-203ENST00000413433 PYGMP11217 842 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 SCNN1BP51168 640 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 COL9A3Q14050 684 aaPredicted RBP7.23□□□□□ -1.25
NOD1-203ENST00000413433 SEPT7Q16181 437 aaKnown RBP7.23□□□□□ -1.25
NOD1-203ENST00000413433 SYCP2LQ5T4T6 812 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 KSR2Q6VAB6 950 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 TRIM59Q8IWR1 403 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 CNTD1Q8N815 330 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 RNF214Q8ND24 703 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 NGDNQ8NEJ9 315 aaKnown RBP7.23□□□□□ -1.25
NOD1-203ENST00000413433 TTC8Q8TAM2 541 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 BTN2A2Q8WVV5 523 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 FBRSQ9HAH7 460 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 NOB1Q9ULX3 412 aaKnown RBP7.23□□□□□ -1.25
NOD1-203ENST00000413433 AP4E1Q9UPM8 1137 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 ZNF451Q9Y4E5 1061 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 SPEF1Q9Y4P9 236 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 TNS3Q68CZ2 1445 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 EP400Q96L91 3159 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 SYNGAP1Q96PV0 1343 aa7.23□□□□□ -1.25
NOD1-203ENST00000413433 COL22A1Q8NFW1 1626 aaPredicted RBP7.23□□□□□ -1.25
NOD1-203ENST00000413433 GLI3P10071 1580 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 BLMP54132 1417 aaPredicted RBP7.22□□□□□ -1.25
NOD1-203ENST00000413433 TMPRSS2O15393 492 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 ZEB2O60315 1214 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 DLX3O60479 287 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 KCNH1O95259 989 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 CT47B1P0C2W7 299 aaPredicted RBP7.22□□□□□ -1.25
NOD1-203ENST00000413433 CD247P20963 164 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 AFF1P51825 1210 aaKnown RBP7.22□□□□□ -1.25
NOD1-203ENST00000413433 RNF4P78317 190 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 TRIM28Q13263 835 aaKnown RBP7.22□□□□□ -1.25
NOD1-203ENST00000413433 CHRNA2Q15822 529 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 NKG7Q16617 165 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 NOL9Q5SY16 702 aaKnown RBP7.22□□□□□ -1.25
NOD1-203ENST00000413433 PRAMEF13Q5VWM6 474 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 C8orf86Q6ZUL3 223 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 MAMDC2Q7Z304 686 aaPredicted RBP7.22□□□□□ -1.25
NOD1-203ENST00000413433 MAP4K3Q8IVH8 894 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 C7orf61Q8IZ16 206 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 SAMD3Q8N6K7 520 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 MRGPRX3Q96LB0 322 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 ATXN3LQ9H3M9 355 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 EMC9Q9Y3B6 208 aa7.22□□□□□ -1.25
NOD1-203ENST00000413433 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.21□□□□□ -1.26
NOD1-203ENST00000413433 BLACEA4D250 179 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 ALBP02768 609 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 SNRPB2P08579 225 aaKnown RBP7.21□□□□□ -1.26
NOD1-203ENST00000413433 GFOD2Q3B7J2 385 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 ANKRD39Q53RE8 183 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 FAM102BQ5T8I3 360 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 NBPF12Q5TAG4 269 aaPredicted RBP7.21□□□□□ -1.26
NOD1-203ENST00000413433 PIK3R6Q5UE93 754 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 SYDE2Q5VT97 1194 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 MSL1Q68DK7 614 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 NXNQ6DKJ4 435 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 TCEAL8Q8IYN2 117 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 ZNF513Q8N8E2 541 aaPredicted RBP7.21□□□□□ -1.26
NOD1-203ENST00000413433 XAGE3Q8WTP9 111 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 COG1Q8WTW3 980 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 RCC1LQ96I51 464 aaKnown RBP7.21□□□□□ -1.26
NOD1-203ENST00000413433 WNK4Q96J92 1243 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 MTFR1LQ9H019 292 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 PIDD1Q9HB75 910 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 GP6Q9HCN6 339 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 SSU72Q9NP77 194 aaKnown RBP7.21□□□□□ -1.26
NOD1-203ENST00000413433 LUC7LQ9NQ29 371 aaKnown RBP7.21□□□□□ -1.26
NOD1-203ENST00000413433 CGGBP1Q9UFW8 167 aaPredicted RBP7.21□□□□□ -1.26
NOD1-203ENST00000413433 FBXL21Q9UKT6 434 aa7.21□□□□□ -1.26
NOD1-203ENST00000413433 SBNO1A3KN83 1393 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 NEMP1O14524 444 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 LDHAP00338 332 aaKnown RBP7.2□□□□□ -1.26
NOD1-203ENST00000413433 CST3P01034 146 aaPredicted RBP7.2□□□□□ -1.26
NOD1-203ENST00000413433 CD68P34810 354 aaPredicted RBP7.2□□□□□ -1.26
NOD1-203ENST00000413433 IL2P60568 153 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 MAP4K2Q12851 820 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 AUHQ13825 339 aaKnown RBP7.2□□□□□ -1.26
NOD1-203ENST00000413433 R3HDM1Q15032 1099 aaKnown RBP7.2□□□□□ -1.26
NOD1-203ENST00000413433 EXOSC6Q5RKV6 272 aaKnown RBP7.2□□□□□ -1.26
NOD1-203ENST00000413433 CDCA2Q69YH5 1023 aaPredicted RBP7.2□□□□□ -1.26
NOD1-203ENST00000413433 IQSEC1Q6DN90 963 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 USP53Q70EK8 1073 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 SCLYQ96I15 445 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 CCDC140Q96MF4 163 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 FANCD2OSQ96PS1 177 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 CAMKK2Q96RR4 588 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms