RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CCDC51Q96ER9 411 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 GOPCQ9HD26 462 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 PIM2Q9P1W9 311 aa22.5■■□□□ 1.19
USP39-204ENST00000409766 LGALS16A8MUM7 142 aa22.49■■□□□ 1.19
USP39-204ENST00000409766 FECHP22830 423 aa22.49■■□□□ 1.19
USP39-204ENST00000409766 SREBF1P36956 1147 aa22.49■■□□□ 1.19
USP39-204ENST00000409766 UBXN1Q04323 297 aa22.49■■□□□ 1.19
USP39-204ENST00000409766 DDX12PQ92771 950 aa22.49■■□□□ 1.19
USP39-204ENST00000409766 NT5C3AQ9H0P0 336 aa22.49■■□□□ 1.19
USP39-204ENST00000409766 SLC39A2Q9NP94 309 aa22.49■■□□□ 1.19
USP39-204ENST00000409766 TAL1P17542 331 aaPredicted RBP22.48■■□□□ 1.19
USP39-204ENST00000409766 TGFB2P61812 414 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 TRIM14Q14142 442 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 SLFN12Q8IYM2 578 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 ETNPPLQ8TBG4 499 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 ZNF507Q8TCN5 953 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 MAGEC2Q9UBF1 373 aaPredicted RBP22.48■■□□□ 1.19
USP39-204ENST00000409766 PGAP2Q9UHJ9 254 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 KDM3AQ9Y4C1 1321 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 SPDYE3A6NKU9 549 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 SLC26A4O43511 780 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 TPM1P09493 284 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 EHHADHQ08426 723 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 Q4G0T1 1027 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 CENPPQ6IPU0 288 aa22.48■■□□□ 1.19
USP39-204ENST00000409766 GOLGA6L9A6NEM1 432 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 SOWAHDA6NJG2 315 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 PIK3CDO00329 1044 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 RRP9O43818 475 aaKnown RBP22.47■■□□□ 1.19
USP39-204ENST00000409766 MTF1Q14872 753 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 FAM83BQ5T0W9 1011 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 MIGA2Q7L4E1 593 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 MB21D1Q8N884 522 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 LENG9Q96B70 501 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 UIMC1Q96RL1 719 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 SEMA6BQ9H3T3 888 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 PHLPP2Q6ZVD8 1323 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 A0A1W2PQC6 194 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 RNF225M0QZC1 329 aaPredicted RBP22.47■■□□□ 1.19
USP39-204ENST00000409766 WNT10BO00744 389 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 TBX3O15119 743 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 HOXA7P31268 230 aaPredicted RBP22.47■■□□□ 1.19
USP39-204ENST00000409766 CAP2P40123 477 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 SYCP1Q15431 976 aa22.47■■□□□ 1.19
USP39-204ENST00000409766 FER1L6Q2WGJ9 1857 aa22.46■■□□□ 1.19
USP39-204ENST00000409766 CIITAP33076 1130 aa22.46■■□□□ 1.19
USP39-204ENST00000409766 MAP3K10Q02779 954 aa22.46■■□□□ 1.19
USP39-204ENST00000409766 SPIRE1Q08AE8 756 aa22.46■■□□□ 1.19
USP39-204ENST00000409766 PSMD2Q13200 908 aa22.46■■□□□ 1.19
USP39-204ENST00000409766 NBPF9Q3BBW0 867 aa22.46■■□□□ 1.19
USP39-204ENST00000409766 PRR16Q569H4 304 aa22.46■■□□□ 1.19
USP39-204ENST00000409766 RAD9BQ6WBX8 426 aa22.46■■□□□ 1.19
USP39-204ENST00000409766 GUF1Q8N442 669 aaKnown RBP22.46■■□□□ 1.19
USP39-204ENST00000409766 DNAJC19Q96DA6 116 aa22.46■■□□□ 1.19
USP39-204ENST00000409766 TUBGCP2Q9BSJ2 902 aa22.46■■□□□ 1.19
USP39-204ENST00000409766 L2HGDHQ9H9P8 463 aa22.46■■□□□ 1.19
USP39-204ENST00000409766 FAM86B1E9PN63 330 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 FAM86B2P0C5J1 330 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 HOXA13P31271 388 aaPredicted RBP22.45■■□□□ 1.18
USP39-204ENST00000409766 TRAF1Q13077 416 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 TEX2Q8IWB9 1127 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 FAM114A1Q8IWE2 563 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 DESI2Q9BSY9 194 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 VCPKMTQ9H867 229 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 ABHD10Q9NUJ1 306 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.45■■□□□ 1.18
USP39-204ENST00000409766 KIAA1024Q9UPX6 916 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 BRCA1P38398 1863 aaKnown RBP22.45■■□□□ 1.18
USP39-204ENST00000409766 IDEP14735 1019 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 CIAPIN1Q6FI81 312 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 EEF2KMTQ96G04 330 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 CNOT6LQ96LI5 555 aaKnown RBP22.45■■□□□ 1.18
USP39-204ENST00000409766 MTFR1LQ9H019 292 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 DNAI1Q9UI46 699 aa22.45■■□□□ 1.18
USP39-204ENST00000409766 STAT3P40763 770 aa22.44■■□□□ 1.18
USP39-204ENST00000409766 DNM2P50570 870 aa22.44■■□□□ 1.18
USP39-204ENST00000409766 DALRD3Q5D0E6 543 aaKnown RBP22.44■■□□□ 1.18
USP39-204ENST00000409766 CHURC1Q8WUH1 139 aa22.44■■□□□ 1.18
USP39-204ENST00000409766 ANKRD7Q92527 254 aa22.44■■□□□ 1.18
USP39-204ENST00000409766 RANBP17Q9H2T7 1088 aaKnown RBP22.44■■□□□ 1.18
USP39-204ENST00000409766 MYOZ2Q9NPC6 264 aa22.44■■□□□ 1.18
USP39-204ENST00000409766 POTEB3A0JP26 581 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 POTECB2RU33 542 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 E9PMD0 336 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 FANCGO15287 622 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 PLA2G6O60733 806 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 CYP3A4P08684 503 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 CCDC175P0C221 793 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 HSP90AA2PQ14568 343 aaPredicted RBP22.43■■□□□ 1.18
USP39-204ENST00000409766 POTEBQ6S5H4 581 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 MTERF4Q7Z6M4 381 aaKnown RBP22.43■■□□□ 1.18
USP39-204ENST00000409766 FAM20AQ96MK3 541 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 MAP7D2Q96T17 732 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 TAOK3Q9H2K8 898 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 ADGRG1Q9Y653 693 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 MED24O75448 989 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 PRKCSHP14314 528 aaPredicted RBP22.43■■□□□ 1.18
USP39-204ENST00000409766 NCBP1Q09161 790 aaKnown RBP22.43■■□□□ 1.18
USP39-204ENST00000409766 SH2D4AQ9H788 454 aa22.43■■□□□ 1.18
USP39-204ENST00000409766 ZNF215Q9UL58 517 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms