RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 PAXBP1Q9Y5B6 917 aa17.09■□□□□ 0.33
MBD1-209ENST00000398495 SPDYE3A6NKU9 549 aa17.08■□□□□ 0.33
MBD1-209ENST00000398495 STX10O60499 249 aa17.08■□□□□ 0.33
MBD1-209ENST00000398495 EGFRP00533 1210 aa17.08■□□□□ 0.33
MBD1-209ENST00000398495 POLD1P28340 1107 aa17.08■□□□□ 0.33
MBD1-209ENST00000398495 RBM10P98175 930 aaKnown RBP17.08■□□□□ 0.33
MBD1-209ENST00000398495 COBLL1Q53SF7 1204 aa17.08■□□□□ 0.33
MBD1-209ENST00000398495 ANKRD40Q6AI12 368 aa17.08■□□□□ 0.33
MBD1-209ENST00000398495 TOGARAM2Q6ZUX3 1019 aa17.08■□□□□ 0.33
MBD1-209ENST00000398495 JDP2Q8WYK2 163 aa17.08■□□□□ 0.33
MBD1-209ENST00000398495 LENG9Q96B70 501 aa17.08■□□□□ 0.33
MBD1-209ENST00000398495 PPP1R1BQ9UD71 204 aaPredicted RBP17.08■□□□□ 0.33
MBD1-209ENST00000398495 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
MBD1-209ENST00000398495 PVALEFA0A1B0GWK0 134 aa17.08■□□□□ 0.32
MBD1-209ENST00000398495 FOSP01100 380 aaPredicted RBP17.08■□□□□ 0.32
MBD1-209ENST00000398495 EEF1GP26641 437 aaKnown RBP17.08■□□□□ 0.32
MBD1-209ENST00000398495 CASP14P31944 242 aa17.08■□□□□ 0.32
MBD1-209ENST00000398495 DDX12PQ92771 950 aa17.08■□□□□ 0.32
MBD1-209ENST00000398495 KIFC2Q96AC6 838 aa17.08■□□□□ 0.32
MBD1-209ENST00000398495 GTPBP4Q9BZE4 634 aaKnown RBP17.08■□□□□ 0.32
MBD1-209ENST00000398495 KDM3AQ9Y4C1 1321 aa17.07■□□□□ 0.32
MBD1-209ENST00000398495 POTEB3A0JP26 581 aa17.07■□□□□ 0.32
MBD1-209ENST00000398495 POTECB2RU33 542 aa17.07■□□□□ 0.32
MBD1-209ENST00000398495 FAM86B1E9PN63 330 aa17.07■□□□□ 0.32
MBD1-209ENST00000398495 KIF2AO00139 706 aaPredicted RBP17.07■□□□□ 0.32
MBD1-209ENST00000398495 CCP110O43303 1012 aa17.07■□□□□ 0.32
MBD1-209ENST00000398495 FAM86B2P0C5J1 330 aa17.07■□□□□ 0.32
MBD1-209ENST00000398495 FXR1P51114 621 aaKnown RBP eCLIP17.07■□□□□ 0.32
MBD1-209ENST00000398495 Q4G0T1 1027 aa17.07■□□□□ 0.32
MBD1-209ENST00000398495 POTEBQ6S5H4 581 aa17.07■□□□□ 0.32
MBD1-209ENST00000398495 CSGALNACT2Q8N6G5 542 aa17.07■□□□□ 0.32
MBD1-209ENST00000398495 NOC3LQ8WTT2 800 aaKnown RBP17.07■□□□□ 0.32
MBD1-209ENST00000398495 MTFR1LQ9H019 292 aa17.07■□□□□ 0.32
MBD1-209ENST00000398495 RANBP17Q9H2T7 1088 aaKnown RBP17.07■□□□□ 0.32
MBD1-209ENST00000398495 PPP2R2CQ9Y2T4 447 aa17.07■□□□□ 0.32
MBD1-209ENST00000398495 BICDL2A1A5D9 508 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 LGALS16A8MUM7 142 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 E9PMD0 336 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 MAP3K10Q02779 954 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 SPIRE1Q08AE8 756 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 MTF1Q14872 753 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 SLFN12Q8IYM2 578 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 SEMA6BQ9H3T3 888 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 MED24O75448 989 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 IDEP14735 1019 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 PPP1R2P41236 205 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 ZNF280AP59817 542 aaPredicted RBP17.06■□□□□ 0.32
MBD1-209ENST00000398495 UBXN1Q04323 297 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 EHHADHQ08426 723 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 RASA3Q14644 834 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 TNIP1Q15025 636 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 SAMD1Q6SPF0 538 aaPredicted RBP17.06■□□□□ 0.32
MBD1-209ENST00000398495 TBC1D5Q92609 795 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 DNAJC19Q96DA6 116 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 FBXO28Q9NVF7 368 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 MAGEC2Q9UBF1 373 aaPredicted RBP17.06■□□□□ 0.32
MBD1-209ENST00000398495 KIAA1024Q9UPX6 916 aa17.06■□□□□ 0.32
MBD1-209ENST00000398495 SOWAHDA6NJG2 315 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 RNF225M0QZC1 329 aaPredicted RBP17.05■□□□□ 0.32
MBD1-209ENST00000398495 PIK3CDO00329 1044 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 SSBP05455 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
MBD1-209ENST00000398495 RASSF7Q02833 373 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 SYT10Q6XYQ8 523 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 CHURC1Q8WUH1 139 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 DESI2Q9BSY9 194 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 LRRC27Q9C0I9 530 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 NT5C3AQ9H0P0 336 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 SH2D4AQ9H788 454 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.05■□□□□ 0.322e-7■■■■□ 20.8
MBD1-209ENST00000398495 PHF20L1A8MW92 1017 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 CIITAP33076 1130 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 NCAPH2Q6IBW4 605 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 RAD9BQ6WBX8 426 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 MB21D1Q8N884 522 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 GLIS3Q8NEA6 775 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 KIF18AQ8NI77 898 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 CNOT6LQ96LI5 555 aaKnown RBP17.05■□□□□ 0.32
MBD1-209ENST00000398495 TEPSINQ96N21 525 aa17.05■□□□□ 0.32
MBD1-209ENST00000398495 ASTN2O75129 1339 aaPredicted RBP17.05■□□□□ 0.32
MBD1-209ENST00000398495 POTEFA5A3E0 1075 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 TBX3O15119 743 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 MSH4O15457 936 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 ZSCAN12O43309 604 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 CTIFO43310 598 aaKnown RBP17.04■□□□□ 0.32
MBD1-209ENST00000398495 CFBP00751 764 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 CYP3A4P08684 503 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 PLA2G4BP0C869 781 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 POTEIP0CG38 1075 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 COASYQ13057 564 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 CENPPQ6IPU0 288 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 POTEGQ6S5H5 508 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 POTEEQ6S8J3 1075 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 FAM160B2Q86V87 743 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 CNGA4Q8IV77 575 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 CYP2W1Q8TAV3 490 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 ZNF507Q8TCN5 953 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 ZNF341Q9BYN7 854 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 BCS1LQ9Y276 419 aa17.04■□□□□ 0.32
MBD1-209ENST00000398495 NPHP3-ACAD11A0A0J9YXS1 232 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms