RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 FECHP22830 423 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 POTEGQ6S5H5 508 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 POTEEQ6S8J3 1075 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 GPBP1Q86WP2 473 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 CDAN1Q8IWY9 1227 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 PIGOQ8TEQ8 1089 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 RWDD2AQ9UIY3 292 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 H7C1D1 291 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 ZNF18P17022 549 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 TBX2Q13207 712 aaPredicted RBP10.36□□□□□ -0.75
PRDM9-201ENST00000296682 E2F4Q16254 413 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 DCAF17Q5H9S7 520 aaPredicted RBP10.36□□□□□ -0.75
PRDM9-201ENST00000296682 KCNK18Q7Z418 384 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 SLC35F6Q8N357 371 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 P2RX5Q93086 422 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 CNKSR1Q969H4 720 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 ERO1AQ96HE7 468 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 TMEM39BQ9GZU3 492 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 FBXO28Q9NVF7 368 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 ERICH4A6NGS2 130 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 GYPCP04921 128 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 PPP2R3AQ06190 1150 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 GALNT17Q6IS24 598 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 FBXO38Q6PIJ6 1188 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 RRAGAQ7L523 313 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 CCDC42Q96M95 316 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 TSG101Q99816 390 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 CCDC94Q9BW85 323 aaPredicted RBP10.36□□□□□ -0.75
PRDM9-201ENST00000296682 BCS1LQ9Y276 419 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 RBBP6Q7Z6E9 1792 aaKnown RBP10.36□□□□□ -0.75
PRDM9-201ENST00000296682 A0A1B0GTH6 734 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 NDUFB10O96000 172 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 TUBB4AP04350 444 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 PPARDQ03181 441 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 GPATCH4Q5T3I0 446 aaKnown RBP10.36□□□□□ -0.75
PRDM9-201ENST00000296682 CNNM4Q6P4Q7 775 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 TMCO3Q6UWJ1 677 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 CERS3Q8IU89 383 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 ARGLU1Q9NWB6 273 aaPredicted RBP10.36□□□□□ -0.75
PRDM9-201ENST00000296682 CGNQ9P2M7 1197 aaKnown RBP10.36□□□□□ -0.75
PRDM9-201ENST00000296682 FZD1Q9UP38 647 aa10.36□□□□□ -0.75
PRDM9-201ENST00000296682 PPP1R11O60927 126 aaPredicted RBP10.35□□□□□ -0.75
PRDM9-201ENST00000296682 MFAP3LO75121 409 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 BMP3P12645 472 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 SPA17Q15506 151 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 KRT26Q7Z3Y9 468 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 C4orf32Q8N8J7 132 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 ZNF397Q8NF99 534 aaPredicted RBP10.35□□□□□ -0.75
PRDM9-201ENST00000296682 OR8K1Q8NGG5 319 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 SEPT11Q9NVA2 429 aaKnown RBP10.35□□□□□ -0.75
PRDM9-201ENST00000296682 PANK4Q9NVE7 773 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 PODXL2Q9NZ53 605 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 RGL1Q9NZL6 768 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 FAM193AP78312 1265 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 CTTNQ14247 550 aaKnown RBP10.35□□□□□ -0.75
PRDM9-201ENST00000296682 CC2D2BQ6DHV5 1058 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 REXO1L1PQ8IX06 675 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 ADSSL1Q8N142 457 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 AMNQ9BXJ7 453 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 ANO3Q9BYT9 981 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 FAM53CQ9NYF3 392 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 SWAP70Q9UH65 585 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 HDAC9Q9UKV0 1011 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 NKRFO15226 690 aaKnown RBP eCLIP10.35□□□□□ -0.75
PRDM9-201ENST00000296682 SRGAP2O75044 1071 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 DAGLBQ8NCG7 672 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 LRRC15Q8TF66 581 aa10.35□□□□□ -0.75
PRDM9-201ENST00000296682 EPN1Q9Y6I3 576 aaPredicted RBP10.35□□□□□ -0.75
PRDM9-201ENST00000296682 SNED1Q8TER0 1413 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 BICDL2A1A5D9 508 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 CLIC2O15247 247 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 ZMYND10O75800 440 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 JDP2Q8WYK2 163 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
PRDM9-201ENST00000296682 CCDC17Q96LX7 622 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 FAM198AQ9UFP1 575 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 PCDHB13Q9Y5F0 798 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 CTAGE9A4FU28 777 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 MYCLP12524 364 aaPredicted RBP10.34□□□□□ -0.75
PRDM9-201ENST00000296682 SMARCA1P28370 1054 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 APBA1Q02410 837 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 DGKZQ13574 1117 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 ZNF772Q68DY9 489 aaPredicted RBP10.34□□□□□ -0.75
PRDM9-201ENST00000296682 CYP26C1Q6V0L0 522 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 APTXQ7Z2E3 356 aaKnown RBP10.34□□□□□ -0.75
PRDM9-201ENST00000296682 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 ST7Q9NRC1 585 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 HDAC6Q9UBN7 1215 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 ADGRG1Q9Y653 693 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 PHACTR2O75167 634 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 KCTD19Q17RG1 926 aaPredicted RBP10.34□□□□□ -0.75
PRDM9-201ENST00000296682 FAM26FQ5R3K3 315 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 NSMFQ6X4W1 530 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 ABHD10Q9NUJ1 306 aa10.34□□□□□ -0.75
PRDM9-201ENST00000296682 PSMD14O00487 310 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 ALAS1P13196 640 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 CCNE1P24864 410 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 TNNT3P45378 269 aaPredicted RBP10.33□□□□□ -0.76
PRDM9-201ENST00000296682 ARHGAP4P98171 946 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms