RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 PPIP5K2O43314 1243 aa19.56■□□□□ 0.72
COL5A3-201ENST00000264828 LRRN2O75325 713 aa19.56■□□□□ 0.72
COL5A3-201ENST00000264828 TRPA1O75762 1119 aa19.56■□□□□ 0.72
COL5A3-201ENST00000264828 EPHB4P54760 987 aa19.56■□□□□ 0.72
COL5A3-201ENST00000264828 MFAP3P55082 362 aa19.56■□□□□ 0.72
COL5A3-201ENST00000264828 TCP11X2Q5H9J9 407 aa19.56■□□□□ 0.72
COL5A3-201ENST00000264828 PPWD1Q96BP3 646 aaKnown RBP19.56■□□□□ 0.72
COL5A3-201ENST00000264828 CHMP6Q96FZ7 201 aa19.56■□□□□ 0.72
COL5A3-201ENST00000264828 KCNG1Q9UIX4 513 aa19.56■□□□□ 0.72
COL5A3-201ENST00000264828 MRPL11Q9Y3B7 192 aaKnown RBP19.56■□□□□ 0.72
COL5A3-201ENST00000264828 DMTNQ08495 405 aa19.56■□□□□ 0.72
COL5A3-201ENST00000264828 FTOQ9C0B1 505 aaKnown RBP eCLIP19.56■□□□□ 0.72
COL5A3-201ENST00000264828 NPHP4O75161 1426 aaPredicted RBP19.56■□□□□ 0.72
COL5A3-201ENST00000264828 TRIP13Q15645 432 aaPredicted RBP19.55■□□□□ 0.72
COL5A3-201ENST00000264828 DOK7Q18PE1 504 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 ODR4Q5SWX8 454 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 ZNF653Q96CK0 615 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 INTUQ9ULD6 942 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 APOEP02649 317 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 PRPSAP1Q14558 356 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 CERKLQ49MI3 558 aaPredicted RBP19.55■□□□□ 0.72
COL5A3-201ENST00000264828 SSH3Q8TE77 659 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 M0R2C6 588 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 MAPK4P31152 587 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 PABPC4Q13310 644 aaKnown RBP eCLIP19.55■□□□□ 0.72
COL5A3-201ENST00000264828 NCAPGQ9BPX3 1015 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 NUB1Q9Y5A7 615 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 BANK1Q8NDB2 785 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 TDRD7Q8NHU6 1098 aaKnown RBP19.55■□□□□ 0.72
COL5A3-201ENST00000264828 RTEL1Q9NZ71 1219 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 DAAM1Q9Y4D1 1078 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 SGO2Q562F6 1265 aa19.55■□□□□ 0.72
COL5A3-201ENST00000264828 HP1BP3Q5SSJ5 553 aaPredicted RBP19.55■□□□□ 0.72
COL5A3-201ENST00000264828 LARSQ9P2J5 1176 aaKnown RBP19.55■□□□□ 0.72
COL5A3-201ENST00000264828 METP08581 1390 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 CARMIL3Q8ND23 1372 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 SLC4A1P02730 911 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 NR2F2P24468 414 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 PTK2Q05397 1052 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 FAM133AQ8N9E0 248 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 IL17REQ8NFR9 667 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 HOOK2Q96ED9 719 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 TRIM37O94972 964 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 S100BP04271 92 aaPredicted RBP19.54■□□□□ 0.72
COL5A3-201ENST00000264828 POLR2BP30876 1174 aaKnown RBP19.54■□□□□ 0.72
COL5A3-201ENST00000264828 SLC7A5Q01650 507 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 ANKRD20A4Q4UJ75 823 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 ANKRD20A8PQ5CZ79 823 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 ANKRD20A2Q5SQ80 823 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 ANKRD20A1Q5TYW2 823 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 TTLL7Q6ZT98 887 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 RUNDC3BQ96NL0 473 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 MAN1B1Q9UKM7 699 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 MYO1FO00160 1098 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 GNGT2O14610 69 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 CLIC2O15247 247 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 ACTN1P12814 892 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 ADPGKQ9BRR6 497 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 WDR91A4D1P6 747 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 TMEM232C9JQI7 657 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 RPS8P62241 208 aaKnown RBP19.54■□□□□ 0.72
COL5A3-201ENST00000264828 MYLK4Q86YV6 388 aaPredicted RBP19.54■□□□□ 0.72
COL5A3-201ENST00000264828 CSRNP1Q96S65 589 aa19.54■□□□□ 0.72
COL5A3-201ENST00000264828 SEPT9Q9UHD8 586 aaPredicted RBP19.54■□□□□ 0.72
COL5A3-201ENST00000264828 PCIF1Q9H4Z3 704 aa19.53■□□□□ 0.72
COL5A3-201ENST00000264828 TLR7Q9NYK1 1049 aaKnown RBP19.53■□□□□ 0.72
COL5A3-201ENST00000264828 ADORA1P30542 326 aa19.53■□□□□ 0.72
COL5A3-201ENST00000264828 PDCD7Q8N8D1 485 aaKnown RBP19.53■□□□□ 0.72
COL5A3-201ENST00000264828 ANAPC5Q9UJX4 755 aa19.53■□□□□ 0.72
COL5A3-201ENST00000264828 LPXNO60711 386 aa19.53■□□□□ 0.72
COL5A3-201ENST00000264828 ABTB1Q969K4 478 aaPredicted RBP19.53■□□□□ 0.72
COL5A3-201ENST00000264828 G3BP2Q9UN86 482 aaKnown RBP19.53■□□□□ 0.72
COL5A3-201ENST00000264828 ATXN8OSP0DMR3 200 aa19.53■□□□□ 0.72
COL5A3-201ENST00000264828 CFAP36Q96G28 342 aa19.53■□□□□ 0.72
COL5A3-201ENST00000264828 IPO11Q9UI26 975 aaKnown RBP19.53■□□□□ 0.72
COL5A3-201ENST00000264828 PALM3A6NDB9 673 aaPredicted RBP19.53■□□□□ 0.72
COL5A3-201ENST00000264828 CPP00450 1065 aa19.53■□□□□ 0.72
COL5A3-201ENST00000264828 ICA1Q05084 483 aa19.53■□□□□ 0.72
COL5A3-201ENST00000264828 NNTQ13423 1086 aa19.53■□□□□ 0.72
COL5A3-201ENST00000264828 GADL1Q6ZQY3 521 aa19.53■□□□□ 0.72
COL5A3-201ENST00000264828 CACTINQ8WUQ7 758 aaKnown RBP19.53■□□□□ 0.72
COL5A3-201ENST00000264828 LARP4BQ92615 738 aaKnown RBP19.53■□□□□ 0.72
COL5A3-201ENST00000264828 SPZ1Q9BXG8 430 aa19.53■□□□□ 0.72
COL5A3-201ENST00000264828 PHLPP2Q6ZVD8 1323 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 AFPP02771 609 aaKnown RBP19.52■□□□□ 0.72
COL5A3-201ENST00000264828 MSH2P43246 934 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 CTNND1O60716 968 aaKnown RBP19.52■□□□□ 0.72
COL5A3-201ENST00000264828 KRT1P04264 644 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 SH3BGRP55822 239 aaPredicted RBP19.52■□□□□ 0.72
COL5A3-201ENST00000264828 GALNT17Q6IS24 598 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 EFCAB13Q8IY85 973 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 NT5C1BQ96P26 610 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 INSRP06213 1382 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 TOM1L1O75674 476 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 NCAPG2Q86XI2 1143 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 GOLGA8SH3BPF8 625 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 ECEL1O95672 775 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 ZBTB38Q8NAP3 1195 aaPredicted RBP19.52■□□□□ 0.72
COL5A3-201ENST00000264828 P2RX5Q93086 422 aa19.52■□□□□ 0.72
COL5A3-201ENST00000264828 SPTLC3Q9NUV7 552 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms