RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 VCX3AQ9NNX9 186 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 KIF19Q2TAC6 998 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 B4GALNT2Q8NHY0 566 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 GCNAQ96QF7 691 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 DESI2Q9BSY9 194 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 SNX25Q9H3E2 840 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 SLC5A4Q9NY91 659 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 IPO11Q9UI26 975 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 ZNF148Q9UQR1 794 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 M0R2C6 588 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 DKC1O60832 514 aaKnown RBP eCLIP18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 ZKSCAN8Q15776 578 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 PGBD3Q8N328 593 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 VMP1Q96GC9 406 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 CABS1Q96KC9 395 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 DNAJC7Q99615 494 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 PDE1BQ01064 536 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 ZNF827Q17R98 1081 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 ZBTB8OSQ8IWT0 167 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 NCLNQ969V3 563 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 TTC25Q96NG3 672 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 PIDD1Q9HB75 910 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 ZNF449Q6P9G9 518 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 KDELC2Q7Z4H8 507 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 HAUS8Q9BT25 410 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 HIP1RO75146 1068 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 TROVE2P10155 538 aaKnown RBP eCLIP18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 KITP10721 976 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 TRIM14Q14142 442 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 HSP90AA5PQ58FG0 334 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 AS3MTQ9HBK9 375 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 TEKT2Q9UIF3 430 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 NFE2L3Q9Y4A8 694 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 ZMYM3Q14202 1370 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 KRIT1O00522 736 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 GPC4O75487 556 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 ZSCAN20P17040 1043 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 CTNNA1P35221 906 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 LRRC24Q50LG9 513 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 TEX2Q8IWB9 1127 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 CCPG1Q9ULG6 757 aa18.49■□□□□ 0.55
CACNA1A-253ENST00000637927 ELF1P32519 619 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 RAB44Q7Z6P3 723 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 AP5M1Q9H0R1 490 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 C1orf131Q8NDD1 294 aaKnown RBP18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 LZICQ8WZA0 190 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 ZMAT2Q96NC0 199 aaKnown RBP18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 DBNDD1Q9H9R9 158 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 HESX1Q9UBX0 185 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 MEIS1O00470 390 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 POLR2MP0CAP2 368 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 SRGAP2CP0DJJ0 459 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 ATP2B4P23634 1241 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 MESDQ14696 234 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 RFWD2Q8NHY2 731 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 ZSCAN10Q96SZ4 725 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 INO80B-WBP1J3KQ70 363 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 PDE6CP51160 858 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 KCTD16Q68DU8 428 aa18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 GPR101Q96P66 508 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 INO80BQ9C086 356 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-253ENST00000637927 GDF11O95390 407 aa18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 BAG6P46379 1132 aa18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 PPFIA4O75335 1185 aa18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 RINT1Q6NUQ1 792 aa18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 METTL23Q86XA0 190 aa18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 SLC16A2P36021 539 aa18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 KIF11P52732 1056 aa18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 BFSP1Q12934 665 aa18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 MAGEB10Q96LZ2 347 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 ZMYND10O75800 440 aa18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 FMNL1O95466 1100 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-253ENST00000637927 TMEM232C9JQI7 657 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 LRRN2O75325 713 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 ZNF75DP51815 510 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 DMP1Q13316 513 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 ZNF496Q96IT1 587 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 CYTH2Q99418 400 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 IFIH1Q9BYX4 1025 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 ASPHQ12797 758 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 THOC5Q13769 683 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 MXD4Q14582 209 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 ARMCX5Q6P1M9 558 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 FBXL13Q8NEE6 735 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 FAM49AQ9H0Q0 323 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 RAD50Q92878 1312 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 GPATCH8Q9UKJ3 1502 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 EVI5O60447 810 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 POLR2FP61218 127 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 SRPK1Q96SB4 655 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 AMFRQ9UKV5 643 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 TRIM67Q6ZTA4 783 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 CACTINQ8WUQ7 758 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 HADHQ16836 314 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 TEKT4Q8WW24 435 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 ZWILCHQ9H900 591 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 TRAPPC8Q9Y2L5 1435 aa18.46■□□□□ 0.55
CACNA1A-253ENST00000637927 PMLP29590 882 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms