RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 ZKSCAN3Q9BRR0 538 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 MMRN2Q9H8L6 949 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 BSDC1Q9NW68 430 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 RWDD2AQ9UIY3 292 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 PCDHA13Q9Y5I0 950 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 DNAJC8O75937 253 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 SMNDC1O75940 238 aaKnown RBP eCLIP11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 LUC7L3O95232 432 aaKnown RBP11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 FTCDO95954 541 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 RASSF7Q02833 373 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 BICDL1Q6ZP65 573 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 ARMC9Q7Z3E5 817 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 B4GALNT2Q8NHY0 566 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 TAF4BQ92750 862 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 LRRC45Q96CN5 670 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 KLHL29Q96CT2 875 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 ZNF570Q96NI8 536 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 NLRP3Q96P20 1036 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 TRIM4Q9C037 500 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 TMBIM4Q9HC24 238 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 FAM207AQ9NSI2 230 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 ZFATQ9P243 1243 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 CORO1CQ9ULV4 474 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 MYH10P35580 1976 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 GOLGA6L10A0A0M3HER8 536 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 RANBP6O60518 1105 aaKnown RBP11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 MMP1P03956 469 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 ATP11AP98196 1134 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 DDX42Q86XP3 938 aaKnown RBP eCLIP11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 SPICE1Q8N0Z3 855 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 CHMP6Q96FZ7 201 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 NGLY1Q96IV0 654 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 PLIN2Q99541 437 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 DNAJC7Q99615 494 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 PPP1R12CQ9BZL4 782 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 TMX4Q9H1E5 349 aaPredicted RBP11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 ANKRD33BA6NCL7 494 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 LGALS16A8MUM7 142 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 KIF6Q6ZMV9 814 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 CYB5R4Q7L1T6 521 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 ELOA2Q8IYF1 753 aaPredicted RBP11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 CCT6BQ92526 530 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 NOX5Q96PH1 765 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 TRIM31Q9BZY9 425 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 KDM4CQ9H3R0 1056 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 EBF2Q9HAK2 575 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 H7C1D1 291 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 GPAA1O43292 621 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 LGR5O75473 907 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 PRCPP42785 496 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 DNM2P50570 870 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 TNNC1P63316 161 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 USP4Q13107 963 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 P3H4Q92791 437 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 FAM210AQ96ND0 272 aa11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 PACSIN2Q9UNF0 486 aaPredicted RBP11.41□□□□□ -0.58
TNFAIP3-208ENST00000615468 HSD17B3P37058 310 aa11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 EIF4A3P38919 411 aaKnown RBP11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 EHHADHQ08426 723 aa11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 ZC3H12AQ5D1E8 599 aaKnown RBP11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 LMNTD2Q8IXW0 634 aa11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 EXOC1Q9NV70 894 aa11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 CWC25Q9NXE8 425 aaPredicted RBP11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 ATP4AP20648 1035 aa11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 KCNJ2P63252 427 aa11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 ZBED6P86452 979 aa11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 CSGALNACT2Q8N6G5 542 aa11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 TEKT4Q8WW24 435 aa11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 RUBCNQ92622 972 aa11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 TUBGCP2Q9BSJ2 902 aa11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 NOC4LQ9BVI4 516 aaKnown RBP11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 PUS7LQ9H0K6 701 aaKnown RBP11.4□□□□□ -0.58
TNFAIP3-208ENST00000615468 KIF11P52732 1056 aa11.4□□□□□ -0.59
TNFAIP3-208ENST00000615468 RTN1Q16799 776 aa11.4□□□□□ -0.59
TNFAIP3-208ENST00000615468 LRRC23Q53EV4 343 aaPredicted RBP11.4□□□□□ -0.59
TNFAIP3-208ENST00000615468 ERICH1Q86X53 443 aa11.4□□□□□ -0.59
TNFAIP3-208ENST00000615468 ZNF579Q8NAF0 562 aaKnown RBP11.4□□□□□ -0.59
TNFAIP3-208ENST00000615468 RGPD1P0DJD0 1748 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 LRRC10BA6NIK2 292 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 PSMA7O14818 248 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 HIP1RO75146 1068 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 IDH1O75874 414 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 FERP16591 822 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 XBP1P17861 261 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 FAM98CQ17RN3 349 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 CRELD2Q6UXH1 353 aaPredicted RBP11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 CACNA2D4Q7Z3S7 1137 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 TMC4Q7Z404 712 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.599e-7■■■□□ 15.3
TNFAIP3-208ENST00000615468 CNOT8Q9UFF9 292 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 STXBP3O00186 592 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 AHCYL1O43865 530 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 ATP2A2P16615 1042 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 ANKRD20A2Q5SQ80 823 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 ANKRD20A1Q5TYW2 823 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 ANKRD20A3Q5VUR7 823 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms