RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 OAS2P29728 719 aaKnown RBP19.22■□□□□ 0.67
NEK3-206ENST00000611833 MCM6Q14566 821 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 MEA1Q16626 185 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 HNRNPLLQ8WVV9 542 aaKnown RBP19.22■□□□□ 0.67
NEK3-206ENST00000611833 PNKPQ96T60 521 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 UBXN6Q9BZV1 441 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 TTYH3Q9C0H2 523 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 BLOC1S4Q9NUP1 217 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 STK17AQ9UEE5 414 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 ADAMTSL1Q8N6G6 1762 aa19.21■□□□□ 0.67
NEK3-206ENST00000611833 TTLL1O95922 423 aa19.21■□□□□ 0.67
NEK3-206ENST00000611833 FXR2P51116 673 aaKnown RBP eCLIP19.21■□□□□ 0.67
NEK3-206ENST00000611833 AMPD2Q01433 879 aa19.21■□□□□ 0.67
NEK3-206ENST00000611833 LARP4BQ92615 738 aaKnown RBP19.21■□□□□ 0.67
NEK3-206ENST00000611833 SEMA6BQ9H3T3 888 aa19.21■□□□□ 0.67
NEK3-206ENST00000611833 NHEJ1Q9H9Q4 299 aaPredicted RBP19.21■□□□□ 0.67
NEK3-206ENST00000611833 JMJD4Q9H9V9 463 aa19.21■□□□□ 0.67
NEK3-206ENST00000611833 USP40Q9NVE5 1235 aa19.21■□□□□ 0.67
NEK3-206ENST00000611833 RAB21Q9UL25 225 aa19.21■□□□□ 0.67
NEK3-206ENST00000611833 TFR2Q9UP52 801 aa19.21■□□□□ 0.67
NEK3-206ENST00000611833 MYMKA6NI61 221 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 RASSF10A6NK89 507 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 PSMD14O00487 310 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 KRT86O43790 486 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 PPP1R11O60927 126 aaPredicted RBP19.2■□□□□ 0.66
NEK3-206ENST00000611833 SHMT1P34896 483 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 SCNN1DP51172 638 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 ZNF543Q08ER8 600 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 COBLL1Q53SF7 1204 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 MIIPQ5JXC2 388 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 NCAPH2Q6IBW4 605 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 DYMQ7RTS9 669 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 JAKMIP2Q96AA8 810 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 PNMA5Q96PV4 448 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 ZC3H12CQ9C0D7 883 aaKnown RBP19.2■□□□□ 0.66
NEK3-206ENST00000611833 ENC1O14682 589 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 TRIM37O94972 964 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 UNC13DQ70J99 1090 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 ZSCAN29Q8IWY8 852 aaPredicted RBP19.2■□□□□ 0.66
NEK3-206ENST00000611833 CCDC170Q8IYT3 715 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 ADGRF4Q8IZF3 695 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 EHBP1Q8NDI1 1231 aa19.2■□□□□ 0.66
NEK3-206ENST00000611833 PVALEFA0A1B0GWK0 134 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 POTEMA6NI47 508 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 TNNI2P48788 182 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 DOK7Q18PE1 504 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 KRT79Q5XKE5 535 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 CENPPQ6IPU0 288 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 TTBK2Q6IQ55 1244 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 ERGIC2Q96RQ1 377 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 ERICH4A6NGS2 130 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 NKRFO15226 690 aaKnown RBP eCLIP19.19■□□□□ 0.66
NEK3-206ENST00000611833 IDEP14735 1019 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 BEND6Q5SZJ8 279 aaPredicted RBP19.19■□□□□ 0.66
NEK3-206ENST00000611833 TRAPPC11Q7Z392 1133 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 SNX29Q8TEQ0 813 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 ZCCHC17Q9NP64 241 aaKnown RBP19.19■□□□□ 0.66
NEK3-206ENST00000611833 SWAP70Q9UH65 585 aa19.19■□□□□ 0.66
NEK3-206ENST00000611833 PNMA6FA0A0J9YX94 578 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 SLURP2P0DP57 97 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 PDIA5Q14554 519 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 UBE2SQ16763 222 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 CDC42EP5Q6NZY7 148 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 HDXQ7Z353 690 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 PROM2Q8N271 834 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 NUDT12Q9BQG2 462 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 HDAC6Q9UBN7 1215 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 A0A1W2PQJ5 194 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 EIF3CLB5ME19 914 aaKnown RBP19.18■□□□□ 0.66
NEK3-206ENST00000611833 FGFR1OPO95684 399 aaKnown RBP19.18■□□□□ 0.66
NEK3-206ENST00000611833 VWA3BQ502W6 1294 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 FIGNQ5HY92 759 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 ZNF662Q6ZS27 426 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 RAD54LQ92698 747 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 EIF3CQ99613 913 aaKnown RBP19.18■□□□□ 0.66
NEK3-206ENST00000611833 ABCB6Q9NP58 842 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 RIC8AQ9NPQ8 531 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 SAR1BQ9Y6B6 198 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 MYO3BQ8WXR4 1341 aa19.18■□□□□ 0.66
NEK3-206ENST00000611833 MAP2K7O14733 419 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 MARCH6O60337 910 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 ATP1A1P05023 1023 aaKnown RBP19.17■□□□□ 0.66
NEK3-206ENST00000611833 TUBBP07437 444 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 SLC16A2P36021 539 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 CLK2P49760 499 aaKnown RBP19.17■□□□□ 0.66
NEK3-206ENST00000611833 NOA1Q8NC60 698 aaKnown RBP19.17■□□□□ 0.66
NEK3-206ENST00000611833 IQCDQ96DY2 449 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 LRRC27Q9C0I9 530 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 GBP3Q9H0R5 595 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 C10orf71Q711Q0 1435 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 CYP2C19P33261 490 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 VSNL1P62760 191 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 ATP2B2Q01814 1243 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 NFIAQ12857 509 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 GPS2Q13227 327 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 APOBEC3HQ6NTF7 200 aaKnown RBP19.17■□□□□ 0.66
NEK3-206ENST00000611833 PPP1R18Q6NYC8 613 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 CCDC42Q96M95 316 aa19.17■□□□□ 0.66
NEK3-206ENST00000611833 GREB1LQ9C091 1923 aaPredicted RBP19.16■□□□□ 0.66
NEK3-206ENST00000611833 CCDC66A2RUB6 948 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms