RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 RMDN3Q96TC7 470 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 MAD2L2Q9UI95 211 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 TAF6LQ9Y6J9 622 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 RBM47A0AV96 593 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 ZBTB5O15062 677 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 EDNRBP24530 442 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 CYP2C18P33260 490 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 EPHB4P54760 987 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 GRM4Q14833 912 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 STXBP2Q15833 593 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 STOX1Q6ZVD7 989 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 SYTL5Q8TDW5 730 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 PIBF1Q8WXW3 757 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 COPS5Q92905 334 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 MAP4K1Q92918 833 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 SEZ6LQ9BYH1 1024 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 HIPK3Q9H422 1215 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 ANO2Q9NQ90 1003 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 MTMR10Q9NXD2 777 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 PCDHA1Q9Y5I3 950 aa11.21□□□□□ -0.61
NPLOC4-212ENST00000573328 PALM3A6NDB9 673 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 B4GALT4O60513 344 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 CD4P01730 458 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 ACRP10323 421 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 CSF2RAP15509 400 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 SMAD3P84022 425 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 PURAQ00577 322 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 TRAF1Q13077 416 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 PSRC1Q6PGN9 363 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 NFXL1Q6ZNB6 911 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 CENPQQ7L2Z9 268 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 CTCFLQ8NI51 663 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 PIGSQ96S52 555 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 IWS1Q96ST2 819 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.2□□□□□ -0.622e-29■□□□□ 11.2
NPLOC4-212ENST00000573328 ESYT1Q9BSJ8 1104 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 MTG1Q9BT17 334 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 MAF1Q9H063 256 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 TRPV6Q9H1D0 765 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 COL20A1Q9P218 1284 aa11.2□□□□□ -0.62
NPLOC4-212ENST00000573328 GRIN2DO15399 1336 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 CCDC69A6NI79 296 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 PRC1O43663 620 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 ARIH2O95376 493 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 GH1P01241 217 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 MYCLP12524 364 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 HOXA13P31271 388 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 CCL23P55773 120 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 ANTXR2P58335 489 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 LY6KQ17RY6 165 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 FAM109BQ6ICB4 259 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 MB21D2Q8IYB1 491 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 ZNF654Q8IZM8 581 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 SLC43A3Q8NBI5 491 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 SLC17A8Q8NDX2 589 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 MYL10Q9BUA6 226 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 ALDH8A1Q9H2A2 487 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 PXMP2Q9NR77 195 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 NOD1Q9Y239 953 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 STXBP5LQ9Y2K9 1186 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 MRVI1Q9Y6F6 885 aa11.19□□□□□ -0.62
NPLOC4-212ENST00000573328 KAT6AQ92794 2004 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 UMODL1Q5DID0 1318 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 KPNA6O60684 536 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 PPP1R11O60927 126 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 NR3C2P08235 984 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 SUPT20HL2P0C7V6 817 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 KIF5BP33176 963 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 MCM5P33992 734 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 HSD17B4P51659 736 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 TROAPQ12815 778 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 NBPF20Q3BBV1 942 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 SKAP1Q86WV1 359 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 PPP1R13LQ8WUF5 828 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 MTMR8Q96EF0 704 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 NOC4LQ9BVI4 516 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 LSG1Q9H089 658 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 MTIF3Q9H2K0 278 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 RIOX1Q9H6W3 641 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 IL23AQ9NPF7 189 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 TRMT13Q9NUP7 481 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 SEC63Q9UGP8 760 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 MYO9BQ13459 2157 aa11.18□□□□□ -0.62
NPLOC4-212ENST00000573328 PNMA6FA0A0J9YX94 578 aa11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 A6NJR5 290 aa11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 OPLAHO14841 1288 aa11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 SLC27A2O14975 620 aa11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 SORBS3O60504 671 aa11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 EIF3JO75822 258 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 DDAH1O94760 285 aa11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 MMP3P08254 477 aa11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 CYP2C9P11712 490 aa11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 DNAJB2P25686 324 aa11.17□□□□□ -0.62
NPLOC4-212ENST00000573328 TMEM240Q5SV17 173 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms