RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 IMPDH2P12268 514 aa8□□□□□ -1.13
VRK1-205ENST00000555402 PMLP29590 882 aa8□□□□□ -1.13
VRK1-205ENST00000555402 NOP2P46087 812 aaKnown RBP8□□□□□ -1.13
VRK1-205ENST00000555402 HMGA2P52926 109 aa8□□□□□ -1.13
VRK1-205ENST00000555402 NBPF6Q5VWK0 638 aa8□□□□□ -1.13
VRK1-205ENST00000555402 NOP9Q86U38 636 aaKnown RBP8□□□□□ -1.13
VRK1-205ENST00000555402 SMARCC2Q8TAQ2 1214 aa8□□□□□ -1.13
VRK1-205ENST00000555402 SHDQ96IW2 340 aa8□□□□□ -1.13
VRK1-205ENST00000555402 NBPF4Q96M43 638 aa8□□□□□ -1.13
VRK1-205ENST00000555402 SCAND2PQ9GZW5 306 aaPredicted RBP8□□□□□ -1.13
VRK1-205ENST00000555402 BCAS3Q9H6U6 928 aa8□□□□□ -1.13
VRK1-205ENST00000555402 SUCOQ9UBS9 1254 aaKnown RBP8□□□□□ -1.13
VRK1-205ENST00000555402 PRKAG3Q9UGI9 489 aa8□□□□□ -1.13
VRK1-205ENST00000555402 MEIS3P2A8K0S8 358 aa7.99□□□□□ -1.13
VRK1-205ENST00000555402 C9IYK1 514 aa7.99□□□□□ -1.13
VRK1-205ENST00000555402 PLATP00750 562 aa7.99□□□□□ -1.13
VRK1-205ENST00000555402 GLI4P10075 376 aa7.99□□□□□ -1.13
VRK1-205ENST00000555402 BMS1Q14692 1282 aaKnown RBP7.99□□□□□ -1.13
VRK1-205ENST00000555402 TBC1D10BQ4KMP7 808 aaPredicted RBP7.99□□□□□ -1.13
VRK1-205ENST00000555402 TNNI3KQ59H18 835 aa7.99□□□□□ -1.13
VRK1-205ENST00000555402 GIMAP6Q6P9H5 292 aa7.99□□□□□ -1.13
VRK1-205ENST00000555402 TTLL7Q6ZT98 887 aa7.99□□□□□ -1.13
VRK1-205ENST00000555402 CCDC144CPQ8IYA2 1237 aa7.99□□□□□ -1.13
VRK1-205ENST00000555402 FAM177A1Q8N128 213 aaPredicted RBP7.99□□□□□ -1.13
VRK1-205ENST00000555402 HNRNPLLQ8WVV9 542 aaKnown RBP7.99□□□□□ -1.13
VRK1-205ENST00000555402 DHRS1Q96LJ7 313 aa7.99□□□□□ -1.13
VRK1-205ENST00000555402 PTCHD1Q96NR3 888 aa7.99□□□□□ -1.13
VRK1-205ENST00000555402 RXFP1Q9HBX9 757 aa7.99□□□□□ -1.13
VRK1-205ENST00000555402 SMAD7O15105 426 aaKnown RBP7.98□□□□□ -1.13
VRK1-205ENST00000555402 TBC1D8O95759 1140 aa7.98□□□□□ -1.13
VRK1-205ENST00000555402 L1CAMP32004 1257 aa7.98□□□□□ -1.13
VRK1-205ENST00000555402 TSPAN17Q96FV3 270 aa7.98□□□□□ -1.13
VRK1-205ENST00000555402 FCRL3Q96P31 734 aaPredicted RBP7.98□□□□□ -1.13
VRK1-205ENST00000555402 ZNRF3Q9ULT6 936 aa7.98□□□□□ -1.13
VRK1-205ENST00000555402 C6P13671 934 aa7.97□□□□□ -1.13
VRK1-205ENST00000555402 GIPRP48546 466 aa7.97□□□□□ -1.13
VRK1-205ENST00000555402 NFE2L2Q16236 605 aa7.97□□□□□ -1.13
VRK1-205ENST00000555402 OR6P1Q8NGX9 317 aa7.97□□□□□ -1.13
VRK1-205ENST00000555402 ADAMTS17Q8TE56 1095 aa7.97□□□□□ -1.13
VRK1-205ENST00000555402 CPA5Q8WXQ8 436 aa7.97□□□□□ -1.13
VRK1-205ENST00000555402 ZBTB8AQ96BR9 441 aa7.97□□□□□ -1.13
VRK1-205ENST00000555402 MRFAP1L1Q96HT8 127 aa7.97□□□□□ -1.13
VRK1-205ENST00000555402 PIF1Q9H611 641 aa7.97□□□□□ -1.13
VRK1-205ENST00000555402 GDF5P43026 501 aa7.96□□□□□ -1.14
VRK1-205ENST00000555402 ZNF445P59923 1031 aa7.96□□□□□ -1.14
VRK1-205ENST00000555402 KRTAP1-1Q07627 177 aa7.96□□□□□ -1.14
VRK1-205ENST00000555402 CACNB2Q08289 660 aaPredicted RBP7.96□□□□□ -1.14
VRK1-205ENST00000555402 RAB33AQ14088 237 aa7.96□□□□□ -1.14
VRK1-205ENST00000555402 PPP2R5EQ16537 467 aa7.96□□□□□ -1.14
VRK1-205ENST00000555402 ANKRD39Q53RE8 183 aa7.96□□□□□ -1.14
VRK1-205ENST00000555402 NOL9Q5SY16 702 aaKnown RBP7.96□□□□□ -1.14
VRK1-205ENST00000555402 FAM169BQ8N8A8 192 aa7.96□□□□□ -1.14
VRK1-205ENST00000555402 CHST13Q8NET6 341 aa7.96□□□□□ -1.14
VRK1-205ENST00000555402 DVL3Q92997 716 aaPredicted RBP7.96□□□□□ -1.14
VRK1-205ENST00000555402 SIRPGQ9P1W8 387 aa7.96□□□□□ -1.14
VRK1-205ENST00000555402 TMA7Q9Y2S6 64 aaKnown RBP7.96□□□□□ -1.14
VRK1-205ENST00000555402 FAM86C2PA6NEL3 165 aa7.95□□□□□ -1.14
VRK1-205ENST00000555402 CCDC85CA6NKD9 419 aa7.95□□□□□ -1.14
VRK1-205ENST00000555402 KLF4O43474 513 aa7.95□□□□□ -1.14
VRK1-205ENST00000555402 INTS3Q68E01 1043 aaKnown RBP7.95□□□□□ -1.14
VRK1-205ENST00000555402 BRF1Q92994 677 aa7.95□□□□□ -1.14
VRK1-205ENST00000555402 SRPK1Q96SB4 655 aaKnown RBP7.95□□□□□ -1.14
VRK1-205ENST00000555402 MRIQ9BWK5 157 aa7.95□□□□□ -1.14
VRK1-205ENST00000555402 ACTR10Q9NZ32 417 aa7.95□□□□□ -1.14
VRK1-205ENST00000555402 CDK11AQ9UQ88 783 aaPredicted RBP7.95□□□□□ -1.14
VRK1-205ENST00000555402 SLPIP03973 132 aa7.94□□□□□ -1.14
VRK1-205ENST00000555402 TACR2P21452 398 aa7.94□□□□□ -1.14
VRK1-205ENST00000555402 KIAA2012Q0VF49 1180 aa7.94□□□□□ -1.14
VRK1-205ENST00000555402 SMAD4Q13485 552 aaKnown RBP7.94□□□□□ -1.14
VRK1-205ENST00000555402 Q8N1X5 172 aa7.94□□□□□ -1.14
VRK1-205ENST00000555402 MENTQ9BUN1 341 aa7.94□□□□□ -1.14
VRK1-205ENST00000555402 SSBP3Q9BWW4 388 aaPredicted RBP7.94□□□□□ -1.14
VRK1-205ENST00000555402 GP6Q9HCN6 339 aa7.94□□□□□ -1.14
VRK1-205ENST00000555402 ACRP10323 421 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 IFNGR1P15260 489 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 PMS1P54277 932 aaKnown RBP7.93□□□□□ -1.14
VRK1-205ENST00000555402 SLC9A5Q14940 896 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 TDRD10Q5VZ19 366 aaKnown RBP7.93□□□□□ -1.14
VRK1-205ENST00000555402 DCAF15Q66K64 600 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 RUFY4Q6ZNE9 571 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 SPRED1Q7Z699 444 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 CABP7Q86V35 215 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 FIBCD1Q8N539 461 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 LINC00482Q8N8I6 264 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 RBBP8NLQ8NC74 664 aaPredicted RBP7.93□□□□□ -1.14
VRK1-205ENST00000555402 SH3RF3Q8TEJ3 882 aaPredicted RBP7.93□□□□□ -1.14
VRK1-205ENST00000555402 ST7Q9NRC1 585 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 ST6GALNAC2Q9UJ37 374 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 INVSQ9Y283 1065 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 FHOD1Q9Y613 1164 aa7.93□□□□□ -1.14
VRK1-205ENST00000555402 SERINC3Q13530 473 aa7.92□□□□□ -1.14
VRK1-205ENST00000555402 RGL3Q3MIN7 710 aa7.92□□□□□ -1.14
VRK1-205ENST00000555402 LARP1BQ659C4 914 aaKnown RBP7.92□□□□□ -1.14
VRK1-205ENST00000555402 LGI4Q8N135 537 aa7.92□□□□□ -1.14
VRK1-205ENST00000555402 SMARCC1Q92922 1105 aaPredicted RBP7.92□□□□□ -1.14
VRK1-205ENST00000555402 DDX11Q96FC9 970 aa7.92□□□□□ -1.14
VRK1-205ENST00000555402 PEX11GQ96HA9 241 aa7.92□□□□□ -1.14
VRK1-205ENST00000555402 NUDT5Q9UKK9 219 aa7.92□□□□□ -1.14
VRK1-205ENST00000555402 SF3B6Q9Y3B4 125 aaKnown RBP7.92□□□□□ -1.14
VRK1-205ENST00000555402 TLDC2A0PJX2 215 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms