RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 SLC10A6Q3KNW5 377 aa6.38□□□□□ -1.39
CSDE1-211ENST00000525970 HSF5Q4G112 596 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-211ENST00000525970 ERICH6BQ5W0A0 696 aa6.38□□□□□ -1.39
CSDE1-211ENST00000525970 CWF19L1Q69YN2 538 aaKnown RBP6.38□□□□□ -1.39
CSDE1-211ENST00000525970 SP8Q8IXZ3 490 aa6.38□□□□□ -1.39
CSDE1-211ENST00000525970 ZSWIM2Q8NEG5 633 aa6.38□□□□□ -1.39
CSDE1-211ENST00000525970 GBP3Q9H0R5 595 aa6.38□□□□□ -1.39
CSDE1-211ENST00000525970 TYW1Q9NV66 732 aaKnown RBP6.38□□□□□ -1.39
CSDE1-211ENST00000525970 PRR13Q9NZ81 148 aa6.38□□□□□ -1.39
CSDE1-211ENST00000525970 PLAAQ9Y263 795 aa6.38□□□□□ -1.39
CSDE1-211ENST00000525970 CD2APQ9Y5K6 639 aa6.38□□□□□ -1.39
CSDE1-211ENST00000525970 A0A1W2PQ45 241 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-211ENST00000525970 A0A1W2PQY0 241 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 CBFA2T2O43439 604 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 PARNO95453 639 aaKnown RBP6.37□□□□□ -1.39
CSDE1-211ENST00000525970 GSNP06396 782 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 BMP8BP34820 402 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 CTSKP43235 329 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 CDR1P51861 262 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 TM4SF20Q53R12 229 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 TAF7LQ5H9L4 462 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 ZC3H12BQ5HYM0 836 aaKnown RBP6.37□□□□□ -1.39
CSDE1-211ENST00000525970 CRTC3Q6UUV7 619 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 ZPBP2Q6X784 338 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 FIBCD1Q8N539 461 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 ZBTB38Q8NAP3 1195 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-211ENST00000525970 ADCY4Q8NFM4 1077 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 FGD4Q96M96 766 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 NOL6Q9H6R4 1146 aaKnown RBP6.37□□□□□ -1.39
CSDE1-211ENST00000525970 EPB41L4AQ9HCS5 686 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-211ENST00000525970 KLHL14Q9P2G3 628 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 SUGT1Q9Y2Z0 365 aa6.37□□□□□ -1.39
CSDE1-211ENST00000525970 KCNQ2O43526 872 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 PPM1BO75688 479 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 ZNF205O95201 554 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 EPHX1P07099 455 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 PPP2R5DQ14738 602 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 CNKSR3Q6P9H4 555 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 DBX2Q6ZNG2 339 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 SLCO6A1Q86UG4 719 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 SGSM3Q96HU1 749 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 ERVK13-1Q9NX77 482 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 WHRNQ9P202 907 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 ACSL6Q9UKU0 697 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 GPR55Q9Y2T6 319 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-211ENST00000525970 SF3B6Q9Y3B4 125 aaKnown RBP6.36□□□□□ -1.39
CSDE1-211ENST00000525970 FHOD1Q9Y613 1164 aa6.36□□□□□ -1.39
CSDE1-211ENST00000525970 ANKRD34BA5PLL1 514 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 OTOL1A6NHN0 477 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-211ENST00000525970 H0Y8X5 98 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 RFPL3O75679 317 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 VAV1P15498 845 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 SDHBP21912 280 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 CBX2Q14781 532 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-211ENST00000525970 LDHDQ86WU2 507 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 FAM129CQ86XR2 697 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 THNSL2Q86YJ6 484 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 TMEFF1Q8IYR6 380 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 LRRC47Q8N1G4 583 aaKnown RBP6.35□□□□□ -1.39
CSDE1-211ENST00000525970 NINJ1Q92982 152 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 KISS1RQ969F8 398 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-211ENST00000525970 PPP1R14AQ96A00 147 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 ZDHHC15Q96MV8 337 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 CDADC1Q9BWV3 514 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 KLHL25Q9H0H3 589 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 TNFRSF12AQ9NP84 129 aa6.35□□□□□ -1.39
CSDE1-211ENST00000525970 LUC7LQ9NQ29 371 aaKnown RBP6.35□□□□□ -1.39
CSDE1-211ENST00000525970 DIS3Q9Y2L1 958 aaKnown RBP6.35□□□□□ -1.39
CSDE1-211ENST00000525970 A0A087WZG4 1122 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 A0A087X0B3 334 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 CCDC163A0A0D9SF12 145 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 CAPNS1P04632 268 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 PDGFRBP09619 1106 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 NOP2P46087 812 aaKnown RBP6.34□□□□□ -1.39
CSDE1-211ENST00000525970 CYP4F8P98187 520 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 CAP1Q01518 475 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 RAB3GAP1Q15042 981 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 FOXB2Q5VYV0 432 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 NOL8Q76FK4 1167 aaKnown RBP6.34□□□□□ -1.39
CSDE1-211ENST00000525970 TMC6Q7Z403 805 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 IGDCC3Q8IVU1 814 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 APBA2Q99767 749 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 SUSD2Q9UGT4 822 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 JAG2Q9Y219 1238 aa6.34□□□□□ -1.39
CSDE1-211ENST00000525970 IQCA1LA6NCM1 817 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 GSTM1P09488 218 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 NAT2P11245 290 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 PRKCAP17252 672 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 ZNF143P52747 638 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-211ENST00000525970 POU4F1Q01851 419 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 NAT16Q8N8M0 369 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 LINC01356Q8N9X3 169 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 MFSD3Q96ES6 412 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 EXOC2Q96KP1 924 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 TEPSINQ96N21 525 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 FAM126AQ9BYI3 521 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-211ENST00000525970 AP5S1Q9NUS5 200 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 PCDHA5Q9Y5H7 936 aa6.33□□□□□ -1.4
CSDE1-211ENST00000525970 A0A1W2PQU0 124 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 ZC3H12DA2A288 527 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms